From d432a48c8e7cc2df95d4952af415f18809f60409 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Thu, 24 Mar 2016 07:26:55 +0100 Subject: Address feedback from CRAN submission - Put the CRAN URL that the badge points to into canonical form. I had missed the requirement to use the canonical form before, as the R CMD check message complained about a (possibily) invalid URL, so I overlooked the explanation later in the check log. Thanks to Uwe for his patience. Fix checked with winbuilder. - Slightly reduced the build time for the compiled_models vignette by skipping the warm-up. 3 repetitions are necessary for the autoplot method to work --- inst/web/DFOP.solution.html | 4 ++-- inst/web/Extract.mmkin.html | 28 ++++++++++++++-------------- inst/web/FOCUS_2006_DFOP_ref_A_to_B.html | 4 ++-- inst/web/FOCUS_2006_FOMC_ref_A_to_F.html | 4 ++-- inst/web/FOCUS_2006_HS_ref_A_to_F.html | 4 ++-- inst/web/FOCUS_2006_SFO_ref_A_to_F.html | 4 ++-- inst/web/FOCUS_2006_datasets.html | 4 ++-- inst/web/FOMC.solution.html | 4 ++-- inst/web/HS.solution.html | 4 ++-- inst/web/IORE.solution.html | 4 ++-- inst/web/SFO.solution.html | 4 ++-- inst/web/SFORB.solution.html | 4 ++-- inst/web/endpoints.html | 4 ++-- inst/web/geometric_mean.html | 4 ++-- inst/web/ilr.html | 4 ++-- inst/web/mccall81_245T.html | 12 ++++++------ inst/web/mkin_long_to_wide.html | 4 ++-- inst/web/mkin_wide_to_long.html | 4 ++-- inst/web/mkinds.html | 4 ++-- inst/web/mkinerrmin.html | 4 ++-- inst/web/mkinfit.html | 14 +++++++------- inst/web/mkinmod.html | 4 ++-- inst/web/mkinparplot.html | 4 ++-- inst/web/mkinplot.html | 4 ++-- inst/web/mkinpredict.html | 10 +++++----- inst/web/mkinresplot.html | 4 ++-- inst/web/mkinsub.html | 4 ++-- inst/web/mmkin.html | 4 ++-- inst/web/plot.mkinfit.html | 4 ++-- inst/web/plot.mmkin.html | 4 ++-- inst/web/print.mkinds.html | 4 ++-- inst/web/print.mkinmod.html | 4 ++-- inst/web/schaefer07_complex_case.html | 4 ++-- inst/web/summary.mkinfit.html | 12 ++++++------ inst/web/synthetic_data_for_UBA.html | 4 ++-- inst/web/transform_odeparms.html | 12 ++++++------ 36 files changed, 104 insertions(+), 104 deletions(-) (limited to 'inst') diff --git a/inst/web/DFOP.solution.html b/inst/web/DFOP.solution.html index fb73ffb8..4746beef 100644 --- a/inst/web/DFOP.solution.html +++ b/inst/web/DFOP.solution.html @@ -2,7 +2,7 @@ -DFOP.solution. mkin 0.9.42 +DFOP.solution. mkin 0.9.43 @@ -32,7 +32,7 @@
- mkin 0.9.42 + mkin 0.9.43
  • Index
    • diff --git a/inst/web/Extract.mmkin.html b/inst/web/Extract.mmkin.html index fd99aa8b..2d77f552 100644 --- a/inst/web/Extract.mmkin.html +++ b/inst/web/Extract.mmkin.html @@ -2,7 +2,7 @@ -[.mmkin. mkin 0.9.42 +[.mmkin. mkin 0.9.43
    - mkin 0.9.42 + mkin 0.9.43
    • Index
      • @@ -181,7 +181,7 @@ $calls $time user system elapsed - 0.288 0.000 0.288 + 0.276 0.000 0.273 $mkinmod <mkinmod> model generated with @@ -367,7 +367,7 @@ function (P) } return(mC) } -<environment: 0x23d9ae8> +<environment: 0x2b9db08> $cost_notrans function (P) @@ -389,7 +389,7 @@ function (P) scaleVar = scaleVar) return(mC) } -<environment: 0x23d9ae8> +<environment: 0x2b9db08> $hessian_notrans parent_0 alpha beta @@ -455,7 +455,7 @@ $bparms.state 99.66619 $date -[1] "Wed Mar 23 18:10:37 2016" +[1] "Thu Mar 24 08:26:19 2016" attr(,"class") [1] "mkinfit" "modFit" @@ -540,7 +540,7 @@ $calls $time user system elapsed - 0.092 0.004 0.096 + 0.088 0.004 0.090 $mkinmod <mkinmod> model generated with @@ -727,7 +727,7 @@ function (P) } return(mC) } -<environment: 0x4023b58> +<environment: 0x47e8398> $cost_notrans function (P) @@ -749,7 +749,7 @@ function (P) scaleVar = scaleVar) return(mC) } -<environment: 0x4023b58> +<environment: 0x47e8398> $hessian_notrans parent_0 k_parent_sink @@ -812,7 +812,7 @@ $bparms.state 99.17407 $date -[1] "Wed Mar 23 18:10:36 2016" +[1] "Thu Mar 24 08:26:19 2016" attr(,"class") [1] "mkinfit" "modFit" @@ -890,7 +890,7 @@ $calls $time user system elapsed - 0.092 0.004 0.096 + 0.088 0.004 0.090 $mkinmod <mkinmod> model generated with @@ -1077,7 +1077,7 @@ function (P) } return(mC) } -<environment: 0x4023b58> +<environment: 0x47e8398> $cost_notrans function (P) @@ -1099,7 +1099,7 @@ function (P) scaleVar = scaleVar) return(mC) } -<environment: 0x4023b58> +<environment: 0x47e8398> $hessian_notrans parent_0 k_parent_sink @@ -1162,7 +1162,7 @@ $bparms.state 99.17407 $date -[1] "Wed Mar 23 18:10:36 2016" +[1] "Thu Mar 24 08:26:19 2016" attr(,"class") [1] "mkinfit" "modFit" diff --git a/inst/web/FOCUS_2006_DFOP_ref_A_to_B.html b/inst/web/FOCUS_2006_DFOP_ref_A_to_B.html index 76911ba7..e5dad993 100644 --- a/inst/web/FOCUS_2006_DFOP_ref_A_to_B.html +++ b/inst/web/FOCUS_2006_DFOP_ref_A_to_B.html @@ -2,7 +2,7 @@ -FOCUS_2006_DFOP_ref_A_to_B. mkin 0.9.42 +FOCUS_2006_DFOP_ref_A_to_B. mkin 0.9.43 @@ -32,7 +32,7 @@
      - mkin 0.9.42 + mkin 0.9.43
      • Index
        • diff --git a/inst/web/FOCUS_2006_FOMC_ref_A_to_F.html b/inst/web/FOCUS_2006_FOMC_ref_A_to_F.html index ac250110..ce238c92 100644 --- a/inst/web/FOCUS_2006_FOMC_ref_A_to_F.html +++ b/inst/web/FOCUS_2006_FOMC_ref_A_to_F.html @@ -2,7 +2,7 @@ -FOCUS_2006_FOMC_ref_A_to_F. mkin 0.9.42 +FOCUS_2006_FOMC_ref_A_to_F. mkin 0.9.43 @@ -32,7 +32,7 @@
        - mkin 0.9.42 + mkin 0.9.43
        • Index
          • diff --git a/inst/web/FOCUS_2006_HS_ref_A_to_F.html b/inst/web/FOCUS_2006_HS_ref_A_to_F.html index e7f5cdd5..a1abc1b6 100644 --- a/inst/web/FOCUS_2006_HS_ref_A_to_F.html +++ b/inst/web/FOCUS_2006_HS_ref_A_to_F.html @@ -2,7 +2,7 @@ -FOCUS_2006_HS_ref_A_to_F. mkin 0.9.42 +FOCUS_2006_HS_ref_A_to_F. mkin 0.9.43 @@ -32,7 +32,7 @@
          - mkin 0.9.42 + mkin 0.9.43
          • Index
            • diff --git a/inst/web/FOCUS_2006_SFO_ref_A_to_F.html b/inst/web/FOCUS_2006_SFO_ref_A_to_F.html index 5bbdaa24..badb4c41 100644 --- a/inst/web/FOCUS_2006_SFO_ref_A_to_F.html +++ b/inst/web/FOCUS_2006_SFO_ref_A_to_F.html @@ -2,7 +2,7 @@ -FOCUS_2006_SFO_ref_A_to_F. mkin 0.9.42 +FOCUS_2006_SFO_ref_A_to_F. mkin 0.9.43 @@ -32,7 +32,7 @@
            - mkin 0.9.42 + mkin 0.9.43
            • Index
              • diff --git a/inst/web/FOCUS_2006_datasets.html b/inst/web/FOCUS_2006_datasets.html index a2ea626c..7aa7f78b 100644 --- a/inst/web/FOCUS_2006_datasets.html +++ b/inst/web/FOCUS_2006_datasets.html @@ -2,7 +2,7 @@ -FOCUS_2006_datasets. mkin 0.9.42 +FOCUS_2006_datasets. mkin 0.9.43 @@ -32,7 +32,7 @@
              - mkin 0.9.42 + mkin 0.9.43
              • Index
                • diff --git a/inst/web/FOMC.solution.html b/inst/web/FOMC.solution.html index 2f6a4097..5c17afe4 100644 --- a/inst/web/FOMC.solution.html +++ b/inst/web/FOMC.solution.html @@ -2,7 +2,7 @@ -FOMC.solution. mkin 0.9.42 +FOMC.solution. mkin 0.9.43 @@ -32,7 +32,7 @@
                - mkin 0.9.42 + mkin 0.9.43
                • Index
                  • diff --git a/inst/web/HS.solution.html b/inst/web/HS.solution.html index d009aa98..7f84cccd 100644 --- a/inst/web/HS.solution.html +++ b/inst/web/HS.solution.html @@ -2,7 +2,7 @@ -HS.solution. mkin 0.9.42 +HS.solution. mkin 0.9.43 @@ -32,7 +32,7 @@
                  - mkin 0.9.42 + mkin 0.9.43
                  • Index
                    • diff --git a/inst/web/IORE.solution.html b/inst/web/IORE.solution.html index 1491bccb..f735b3ad 100644 --- a/inst/web/IORE.solution.html +++ b/inst/web/IORE.solution.html @@ -2,7 +2,7 @@ -IORE.solution. mkin 0.9.42 +IORE.solution. mkin 0.9.43 @@ -32,7 +32,7 @@
                    - mkin 0.9.42 + mkin 0.9.43
                    • Index
                      • diff --git a/inst/web/SFO.solution.html b/inst/web/SFO.solution.html index 33ba8778..2f0d2ff1 100644 --- a/inst/web/SFO.solution.html +++ b/inst/web/SFO.solution.html @@ -2,7 +2,7 @@ -SFO.solution. mkin 0.9.42 +SFO.solution. mkin 0.9.43 @@ -32,7 +32,7 @@
                      - mkin 0.9.42 + mkin 0.9.43
                      • Index
                        • diff --git a/inst/web/SFORB.solution.html b/inst/web/SFORB.solution.html index 42c5a57f..0285188b 100644 --- a/inst/web/SFORB.solution.html +++ b/inst/web/SFORB.solution.html @@ -2,7 +2,7 @@ -SFORB.solution. mkin 0.9.42 +SFORB.solution. mkin 0.9.43 @@ -32,7 +32,7 @@
                        - mkin 0.9.42 + mkin 0.9.43
                        • Index
                          • diff --git a/inst/web/endpoints.html b/inst/web/endpoints.html index 9ddcc8b4..0566d93f 100644 --- a/inst/web/endpoints.html +++ b/inst/web/endpoints.html @@ -2,7 +2,7 @@ -endpoints. mkin 0.9.42 +endpoints. mkin 0.9.43
                          - mkin 0.9.42 + mkin 0.9.43
                          • Index
                            • diff --git a/inst/web/geometric_mean.html b/inst/web/geometric_mean.html index 9d47ebdc..82caad0e 100644 --- a/inst/web/geometric_mean.html +++ b/inst/web/geometric_mean.html @@ -2,7 +2,7 @@ -geometric_mean. mkin 0.9.42 +geometric_mean. mkin 0.9.43 @@ -32,7 +32,7 @@
                            - mkin 0.9.42 + mkin 0.9.43
                            • Index
                              • diff --git a/inst/web/ilr.html b/inst/web/ilr.html index cb0eef23..bcf1fc26 100644 --- a/inst/web/ilr.html +++ b/inst/web/ilr.html @@ -2,7 +2,7 @@ -ilr. mkin 0.9.42 +ilr. mkin 0.9.43
                              - mkin 0.9.42 + mkin 0.9.43
                              • Index
                                • diff --git a/inst/web/mccall81_245T.html b/inst/web/mccall81_245T.html index 5b191184..00338040 100644 --- a/inst/web/mccall81_245T.html +++ b/inst/web/mccall81_245T.html @@ -2,7 +2,7 @@ -mccall81_245T. mkin 0.9.42 +mccall81_245T. mkin 0.9.43 @@ -32,7 +32,7 @@
                                - mkin 0.9.42 + mkin 0.9.43
                                • Index
                                  • @@ -112,10 +112,10 @@ fixed_parms = "k_phenol_sink", quiet = TRUE) summary(fit.2, data = FALSE)
                                -
                                mkin version: 0.9.42 +
                                mkin version: 0.9.43 R version: 3.2.4 -Date of fit: Wed Mar 23 18:10:44 2016 -Date of summary: Wed Mar 23 18:10:44 2016 +Date of fit: Thu Mar 24 08:26:26 2016 +Date of summary: Thu Mar 24 08:26:26 2016 Equations: d_T245 = - k_T245_sink * T245 - k_T245_phenol * T245 @@ -124,7 +124,7 @@ d_anisole = + k_phenol_anisole * phenol - k_anisole_sink * anisole Model predictions using solution type deSolve -Fitted with method Port using 246 model solutions performed in 1.482 s +Fitted with method Port using 246 model solutions performed in 1.451 s Weighting: none diff --git a/inst/web/mkin_long_to_wide.html b/inst/web/mkin_long_to_wide.html index de36532f..e58ce305 100644 --- a/inst/web/mkin_long_to_wide.html +++ b/inst/web/mkin_long_to_wide.html @@ -2,7 +2,7 @@ -mkin_long_to_wide. mkin 0.9.42 +mkin_long_to_wide. mkin 0.9.43
                                - mkin 0.9.42 + mkin 0.9.43
                                • Index
                                  • diff --git a/inst/web/mkin_wide_to_long.html b/inst/web/mkin_wide_to_long.html index 08abc942..ab4f7dbb 100644 --- a/inst/web/mkin_wide_to_long.html +++ b/inst/web/mkin_wide_to_long.html @@ -2,7 +2,7 @@ -mkin_wide_to_long. mkin 0.9.42 +mkin_wide_to_long. mkin 0.9.43
                                  - mkin 0.9.42 + mkin 0.9.43
                                  • Index
                                    • diff --git a/inst/web/mkinds.html b/inst/web/mkinds.html index 5e0f5001..f89128bf 100644 --- a/inst/web/mkinds.html +++ b/inst/web/mkinds.html @@ -2,7 +2,7 @@ -mkinds. mkin 0.9.42 +mkinds. mkin 0.9.43 @@ -32,7 +32,7 @@
                                    - mkin 0.9.42 + mkin 0.9.43
                                    • Index
                                      • diff --git a/inst/web/mkinerrmin.html b/inst/web/mkinerrmin.html index f5ab043f..ba665376 100644 --- a/inst/web/mkinerrmin.html +++ b/inst/web/mkinerrmin.html @@ -2,7 +2,7 @@ -mkinerrmin. mkin 0.9.42 +mkinerrmin. mkin 0.9.43 @@ -32,7 +32,7 @@
                                      - mkin 0.9.42 + mkin 0.9.43
                                      • Index
                                        • diff --git a/inst/web/mkinfit.html b/inst/web/mkinfit.html index 5b843ae2..43aee184 100644 --- a/inst/web/mkinfit.html +++ b/inst/web/mkinfit.html @@ -2,7 +2,7 @@ -mkinfit. mkin 0.9.42 +mkinfit. mkin 0.9.43
                                        - mkin 0.9.42 + mkin 0.9.43
                                        • Index
                                          • @@ -323,17 +323,17 @@ fit <- mkinfit("FOMC", FOCUS_2006_C, quiet = TRUE) summary(fit)
                                        -
                                        mkin version: 0.9.42 +
                                        mkin version: 0.9.43 R version: 3.2.4 -Date of fit: Wed Mar 23 18:10:46 2016 -Date of summary: Wed Mar 23 18:10:46 2016 +Date of fit: Thu Mar 24 08:26:29 2016 +Date of summary: Thu Mar 24 08:26:29 2016 Equations: d_parent = - (alpha/beta) * 1/((time/beta) + 1) * parent Model predictions using solution type analytical -Fitted with method Port using 64 model solutions performed in 0.191 s +Fitted with method Port using 64 model solutions performed in 0.205 s Weighting: none @@ -409,7 +409,7 @@ print(system.time(fit <- mkinfit(SFO_SFO, FOCUS_2006_D, solution_type = "eigen", quiet = TRUE)))
                                        user system elapsed - 1.204 1.280 0.942 + 1.200 1.252 0.926
                                        coef(fit)
                                        diff --git a/inst/web/mkinmod.html b/inst/web/mkinmod.html index b3a396b9..0a361956 100644 --- a/inst/web/mkinmod.html +++ b/inst/web/mkinmod.html @@ -2,7 +2,7 @@ -mkinmod. mkin 0.9.42 +mkinmod. mkin 0.9.43
                                        - mkin 0.9.42 + mkin 0.9.43
                                        • Index
                                          • diff --git a/inst/web/mkinparplot.html b/inst/web/mkinparplot.html index 8eee6868..59fddb39 100644 --- a/inst/web/mkinparplot.html +++ b/inst/web/mkinparplot.html @@ -2,7 +2,7 @@ -mkinparplot. mkin 0.9.42 +mkinparplot. mkin 0.9.43
                                          - mkin 0.9.42 + mkin 0.9.43
                                          • Index
                                            • diff --git a/inst/web/mkinplot.html b/inst/web/mkinplot.html index c4542072..1b9a8a02 100644 --- a/inst/web/mkinplot.html +++ b/inst/web/mkinplot.html @@ -2,7 +2,7 @@ -mkinplot. mkin 0.9.42 +mkinplot. mkin 0.9.43
                                            - mkin 0.9.42 + mkin 0.9.43
                                            • Index
                                              • diff --git a/inst/web/mkinpredict.html b/inst/web/mkinpredict.html index 76814960..c831f011 100644 --- a/inst/web/mkinpredict.html +++ b/inst/web/mkinpredict.html @@ -2,7 +2,7 @@ -mkinpredict. mkin 0.9.42 +mkinpredict. mkin 0.9.43
                                              - mkin 0.9.42 + mkin 0.9.43
                                              • Index
                                                • @@ -304,7 +304,7 @@ 201 20 4.978707 27.46227
                                              user system elapsed - 0.004 0.024 0.004 + 0.008 0.020 0.005
                                              system.time( print(mkinpredict(SFO_SFO, c(k_parent_m1 = 0.05, k_parent_sink = 0.1, k_m1_sink = 0.01), @@ -315,7 +315,7 @@ 201 20 4.978707 27.46227
                                              user system elapsed - 0.016 0.004 0.002 + 0.008 0.012 0.003
                                              system.time( print(mkinpredict(SFO_SFO, c(k_parent_m1 = 0.05, k_parent_sink = 0.1, k_m1_sink = 0.01), @@ -326,7 +326,7 @@ 201 20 4.978707 27.46227
                                              user system elapsed - 0.048 0.008 0.055 + 0.056 0.000 0.052
                                              diff --git a/inst/web/mkinresplot.html b/inst/web/mkinresplot.html index 5a2388dc..b5f32633 100644 --- a/inst/web/mkinresplot.html +++ b/inst/web/mkinresplot.html @@ -2,7 +2,7 @@ -mkinresplot. mkin 0.9.42 +mkinresplot. mkin 0.9.43
                                              - mkin 0.9.42 + mkin 0.9.43
                                              • Index
                                                • diff --git a/inst/web/mkinsub.html b/inst/web/mkinsub.html index 2b92fbbc..bd8e1de6 100644 --- a/inst/web/mkinsub.html +++ b/inst/web/mkinsub.html @@ -2,7 +2,7 @@ -mkinsub. mkin 0.9.42 +mkinsub. mkin 0.9.43
                                                - mkin 0.9.42 + mkin 0.9.43
                                                • Index
                                                  • diff --git a/inst/web/mmkin.html b/inst/web/mmkin.html index 754be268..d2d1ac28 100644 --- a/inst/web/mmkin.html +++ b/inst/web/mmkin.html @@ -2,7 +2,7 @@ -mmkin. mkin 0.9.42 +mmkin. mkin 0.9.43
                                                  - mkin 0.9.42 + mkin 0.9.43
                                                  • Index
                                                    • diff --git a/inst/web/plot.mkinfit.html b/inst/web/plot.mkinfit.html index 1da0c8e8..11e11d7f 100644 --- a/inst/web/plot.mkinfit.html +++ b/inst/web/plot.mkinfit.html @@ -2,7 +2,7 @@ -plot.mkinfit. mkin 0.9.42 +plot.mkinfit. mkin 0.9.43
                                                    - mkin 0.9.42 + mkin 0.9.43
                                                    • Index
                                                      • diff --git a/inst/web/plot.mmkin.html b/inst/web/plot.mmkin.html index 587bf894..def3a11d 100644 --- a/inst/web/plot.mmkin.html +++ b/inst/web/plot.mmkin.html @@ -2,7 +2,7 @@ -plot.mmkin. mkin 0.9.42 +plot.mmkin. mkin 0.9.43
                                                      - mkin 0.9.42 + mkin 0.9.43
                                                      • Index
                                                        • diff --git a/inst/web/print.mkinds.html b/inst/web/print.mkinds.html index 285684fd..6ff9e02a 100644 --- a/inst/web/print.mkinds.html +++ b/inst/web/print.mkinds.html @@ -2,7 +2,7 @@ -print.mkinds. mkin 0.9.42 +print.mkinds. mkin 0.9.43 @@ -32,7 +32,7 @@
                                                        - mkin 0.9.42 + mkin 0.9.43
                                                        • Index
                                                          • diff --git a/inst/web/print.mkinmod.html b/inst/web/print.mkinmod.html index d773050d..16c59669 100644 --- a/inst/web/print.mkinmod.html +++ b/inst/web/print.mkinmod.html @@ -2,7 +2,7 @@ -print.mkinmod. mkin 0.9.42 +print.mkinmod. mkin 0.9.43 @@ -32,7 +32,7 @@
                                                          - mkin 0.9.42 + mkin 0.9.43
                                                          • Index
                                                            • diff --git a/inst/web/schaefer07_complex_case.html b/inst/web/schaefer07_complex_case.html index c6b9e980..f2975fe6 100644 --- a/inst/web/schaefer07_complex_case.html +++ b/inst/web/schaefer07_complex_case.html @@ -2,7 +2,7 @@ -schaefer07_complex_case. mkin 0.9.42 +schaefer07_complex_case. mkin 0.9.43 @@ -32,7 +32,7 @@
                                                            - mkin 0.9.42 + mkin 0.9.43
                                                            • Index
                                                              • diff --git a/inst/web/summary.mkinfit.html b/inst/web/summary.mkinfit.html index 40e3ca63..4ef29e42 100644 --- a/inst/web/summary.mkinfit.html +++ b/inst/web/summary.mkinfit.html @@ -2,7 +2,7 @@ -summary.mkinfit. mkin 0.9.42 +summary.mkinfit. mkin 0.9.43
                                                              - mkin 0.9.42 + mkin 0.9.43
                                                              • Index
                                                                • @@ -157,17 +157,17 @@

                                                                Examples

                                                                  summary(mkinfit(mkinmod(parent = list(type = "SFO")), FOCUS_2006_A, quiet = TRUE))
 
                                                                
-
                                                                mkin version:    0.9.42 
+
                                                                mkin version:    0.9.43 
 R version:       3.2.4 
-Date of fit:     Wed Mar 23 18:10:56 2016 
-Date of summary: Wed Mar 23 18:10:56 2016 
+Date of fit:     Thu Mar 24 08:26:38 2016 
+Date of summary: Thu Mar 24 08:26:38 2016 
 
 Equations:
 d_parent = - k_parent_sink * parent
 
 Model predictions using solution type analytical 
 
-Fitted with method Port using 35 model solutions performed in 0.109 s
+Fitted with method Port using 35 model solutions performed in 0.099 s
 
 Weighting: none
 
diff --git a/inst/web/synthetic_data_for_UBA.html b/inst/web/synthetic_data_for_UBA.html
index 9fb9d23e..56a646c1 100644
--- a/inst/web/synthetic_data_for_UBA.html
+++ b/inst/web/synthetic_data_for_UBA.html
@@ -2,7 +2,7 @@
 
   
     
-synthetic_data_for_UBA_2014. mkin 0.9.42
+synthetic_data_for_UBA_2014. mkin 0.9.43
 
 
 
@@ -32,7 +32,7 @@
     
                                                                
   
                                                                
     
                                                                
-      mkin 0.9.42
+      mkin 0.9.43
       
                                                                
         
                                                                  
           
                                                                •  Index
                                                                  • 
diff --git a/inst/web/transform_odeparms.html b/inst/web/transform_odeparms.html
index 34428004..5e16551f 100644
--- a/inst/web/transform_odeparms.html
+++ b/inst/web/transform_odeparms.html
@@ -2,7 +2,7 @@
 
   
     
-transform_odeparms. mkin 0.9.42
+transform_odeparms. mkin 0.9.43
 
 
   
                                                                  
     
                                                                  
-      mkin 0.9.42
+      mkin 0.9.43
       
                                                                  
         
                                                                    
           
                                                                  •  Index
                                                                    • 
@@ -133,10 +133,10 @@ backtransform_odeparms(transparms, mkinmod,  transform_rates = TRUE, t
 fit <- mkinfit(SFO_SFO, FOCUS_2006_D, quiet = TRUE)
 summary(fit, data=FALSE) # See transformed and backtransformed parameters
 
                                                                  
-
                                                                  mkin version:    0.9.42 
+
                                                                  mkin version:    0.9.43 
 R version:       3.2.4 
-Date of fit:     Wed Mar 23 18:10:57 2016 
-Date of summary: Wed Mar 23 18:10:57 2016 
+Date of fit:     Thu Mar 24 08:26:40 2016 
+Date of summary: Thu Mar 24 08:26:40 2016 
 
 Equations:
 d_parent = - k_parent_sink * parent - k_parent_m1 * parent
@@ -144,7 +144,7 @@ d_m1 = + k_parent_m1 * parent - k_m1_sink * m1
 
 Model predictions using solution type deSolve 
 
-Fitted with method Port using 153 model solutions performed in 0.669 s
+Fitted with method Port using 153 model solutions performed in 0.662 s
 
 Weighting: none
 
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