From 801e95f1cc7bfcc8480f6f49b9da2331be71d1a9 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Wed, 6 Jun 2018 02:10:37 +0200 Subject: Static documentation rebuilt by pkgdown::build_site() --- docs/reference/calplot.lm-1.png | Bin 69416 -> 73353 bytes docs/reference/calplot.lm.html | 32 +++++-- docs/reference/chemCal-package.html | 28 ++++-- docs/reference/din32645-1.png | Bin 66191 -> 71727 bytes docs/reference/din32645.html | 30 +++++-- docs/reference/index.html | 164 +++++++++++++++++++----------------- docs/reference/inverse.predict.html | 30 +++++-- docs/reference/lod.html | 32 +++++-- docs/reference/loq.html | 32 +++++-- docs/reference/massart97ex1.html | 28 ++++-- docs/reference/massart97ex3-1.png | Bin 51775 -> 54164 bytes docs/reference/massart97ex3.html | 30 +++++-- 12 files changed, 280 insertions(+), 126 deletions(-) (limited to 'docs/reference') diff --git a/docs/reference/calplot.lm-1.png b/docs/reference/calplot.lm-1.png index c90b25f..aa0286d 100644 Binary files a/docs/reference/calplot.lm-1.png and b/docs/reference/calplot.lm-1.png differ diff --git a/docs/reference/calplot.lm.html b/docs/reference/calplot.lm.html index 910e4ea..7eda066 100644 --- a/docs/reference/calplot.lm.html +++ b/docs/reference/calplot.lm.html @@ -21,17 +21,23 @@ + + + - - - + + + + + + @@ -54,8 +60,12 @@ - chemCal + + chemCal + 0.1.37.9001 + + @@ -76,21 +87,25 @@ -
+

Plot calibration graphs from univariate linear models

+ +
+

Produce graphics of calibration data, the fitted model as well as confidence, and, for unweighted regression, prediction bands.

+ 
calplot(object, xlim = c("auto", "auto"), ylim = c("auto", "auto"),
     xlab = "Concentration", ylab = "Response", alpha=0.05, varfunc = NULL)
-

Arguments

+

Arguments

@@ -149,7 +164,7 @@

Examples

data(massart97ex3)
 m <- lm(y ~ x, data = massart97ex3)
-calplot(m)
+calplot(m)
+ + + diff --git a/docs/reference/chemCal-package.html b/docs/reference/chemCal-package.html index ee92d84..8e6f39b 100644 --- a/docs/reference/chemCal-package.html +++ b/docs/reference/chemCal-package.html @@ -21,16 +21,22 @@ + + + - - - + + + + + + @@ -53,8 +59,12 @@ - chemCal + + chemCal + 0.1.37.9001 + + @@ -75,15 +86,19 @@ -
+

Calibration functions for analytical chemistry

+ +
+

See ../DESCRIPTION

+

Details

@@ -118,5 +133,8 @@
+ + + diff --git a/docs/reference/din32645-1.png b/docs/reference/din32645-1.png index d04e5fe..9dc7295 100644 Binary files a/docs/reference/din32645-1.png and b/docs/reference/din32645-1.png differ diff --git a/docs/reference/din32645.html b/docs/reference/din32645.html index 5e2bf2d..03170e0 100644 --- a/docs/reference/din32645.html +++ b/docs/reference/din32645.html @@ -21,16 +21,22 @@ + + + - - - + + + + + + @@ -53,8 +59,12 @@ - chemCal + + chemCal + 0.1.37.9001 +
+
@@ -75,15 +86,19 @@ -
+

Calibration data from DIN 32645

+ +
+

Sample dataset to test the package.

+ 
data(din32645)
@@ -105,7 +120,7 @@

Examples

data(din32645)
 m <- lm(y ~ x, data = din32645)
-calplot(m)

+calplot(m)

 ## Prediction of x with confidence interval
 (prediction <- inverse.predict(m, 3500, alpha = 0.01))
#> $Prediction
 #> [1] 0.1054792
@@ -180,5 +195,8 @@
       
    

 
+  
+
   
 
+
diff --git a/docs/reference/index.html b/docs/reference/index.html
index 9b514f2..ce4f346 100644
--- a/docs/reference/index.html
+++ b/docs/reference/index.html
@@ -21,13 +21,19 @@
 
 
 
+
+
+
 
 
-
 
-  
-  
+
+
+
 
+
+
+
 
 
 
@@ -50,8 +56,12 @@
         
         
       
-      chemCal
+      
+        chemCal
+        0.1.37.9001
+
+
@@ -72,82 +83,78 @@ -
-
+
+
-

- Reference - version 0.1-37.9001 -

+

Reference

-
-
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-

All functions

-

-
-

calplot

-

Plot calibration graphs from univariate linear models

-

chemCal-package

-

Calibration functions for analytical chemistry

-

data

-

Calibration data from DIN 32645

-

inverse.predict

-

Predict x from y for a linear calibration

-

lod

-

Estimate a limit of detection (LOD)

-

loq

-

Estimate a limit of quantification (LOQ)

-

data

-

Calibration data from Massart et al. (1997), example 1

-

data

-

Calibration data from Massart et al. (1997), example 3

-
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
+

All functions

+

+
+

calplot()

+

Plot calibration graphs from univariate linear models

+

chemCal-package

+

Calibration functions for analytical chemistry

+

din32645

+

Calibration data from DIN 32645

+

inverse.predict()

+

Predict x from y for a linear calibration

+

lod()

+

Estimate a limit of detection (LOD)

+

loq()

+

Estimate a limit of quantification (LOQ)

+

massart97ex1

+

Calibration data from Massart et al. (1997), example 1

+

massart97ex3

+

Calibration data from Massart et al. (1997), example 3

+ + + diff --git a/docs/reference/inverse.predict.html b/docs/reference/inverse.predict.html index 32f8f44..672e322 100644 --- a/docs/reference/inverse.predict.html +++ b/docs/reference/inverse.predict.html @@ -21,12 +21,15 @@ + + + - - - + + + + + + @@ -62,8 +68,12 @@ - chemCal + + chemCal + 0.1.37.9001 +
+ @@ -84,12 +95,15 @@ -
+

Predict x from y for a linear calibration

+ +
+

This function predicts x values using a univariate linear model that has been generated for the purpose of calibrating a measurement method. Prediction @@ -102,11 +116,12 @@ differing from the precision in standard samples used for the calibration. This is elaborated in the package vignette.

+ 
inverse.predict(object, newdata, …,
   ws, alpha=0.05, var.s = "auto")
-

Arguments

+

Arguments

@@ -226,5 +241,8 @@ + + + diff --git a/docs/reference/lod.html b/docs/reference/lod.html index 13ce70a..7519f19 100644 --- a/docs/reference/lod.html +++ b/docs/reference/lod.html @@ -21,12 +21,15 @@ + + + - - - + + + + + + @@ -60,8 +66,12 @@ - chemCal + + chemCal + 0.1.37.9001 + + @@ -82,12 +93,15 @@ -
+

Estimate a limit of detection (LOD)

+ +
+

The decision limit (German: Nachweisgrenze) is defined as the signal or analyte concentration that is significantly different from the blank signal @@ -98,10 +112,11 @@ the analyte is present (type II or false negative error), is beta (also a one-sided significance test).

+ 
lod(object, …, alpha = 0.05, beta = 0.05, method = "default", tol = "default")
-

Arguments

+

Arguments

@@ -169,7 +184,7 @@

See also

-

Examples for din32645

+

Examples for din32645

Examples

@@ -223,5 +238,8 @@ + + + diff --git a/docs/reference/loq.html b/docs/reference/loq.html index 2fb01a8..09567db 100644 --- a/docs/reference/loq.html +++ b/docs/reference/loq.html @@ -21,12 +21,15 @@ + + + - - - + + + + + + @@ -59,8 +65,12 @@ - chemCal + + chemCal + 0.1.37.9001 + + @@ -81,12 +92,15 @@ -
+

Estimate a limit of quantification (LOQ)

+ +
+

The limit of quantification is the x value, where the relative error of the quantification given the calibration model reaches a prespecified @@ -96,11 +110,12 @@ (DIN 32645, equivalent to ISO 11843). c(L) is internally estimated by inverse.predict, and L is obtained by iteration.

+ 
loq(object, …, alpha = 0.05, k = 3, n = 1, w.loq = "auto",
     var.loq = "auto", tol = "default")
-

Arguments

+

Arguments

@@ -165,7 +180,7 @@

See also

-

Examples for din32645

+

Examples for din32645

Examples

@@ -217,5 +232,8 @@ + + + diff --git a/docs/reference/massart97ex1.html b/docs/reference/massart97ex1.html index 637d524..ddd1ce1 100644 --- a/docs/reference/massart97ex1.html +++ b/docs/reference/massart97ex1.html @@ -21,16 +21,22 @@ + + + - - - + + + + + + @@ -53,8 +59,12 @@ - chemCal + + chemCal + 0.1.37.9001 + + @@ -75,15 +86,19 @@ -
+

Calibration data from Massart et al. (1997), example 1

+ +
+

Sample dataset from p. 175 to test the package.

+ 
data(massart97ex1)
@@ -123,5 +138,8 @@
+ + + diff --git a/docs/reference/massart97ex3-1.png b/docs/reference/massart97ex3-1.png index 88668fa..247eca0 100644 Binary files a/docs/reference/massart97ex3-1.png and b/docs/reference/massart97ex3-1.png differ diff --git a/docs/reference/massart97ex3.html b/docs/reference/massart97ex3.html index d737fc5..434fc7b 100644 --- a/docs/reference/massart97ex3.html +++ b/docs/reference/massart97ex3.html @@ -21,16 +21,22 @@ + + + - - - + + + + + + @@ -53,8 +59,12 @@ - chemCal + + chemCal + 0.1.37.9001 +
+
@@ -75,15 +86,19 @@ -
+

Calibration data from Massart et al. (1997), example 3

+ +
+

Sample dataset from p. 188 to test the package.

+ 
data(massart97ex3)
@@ -109,7 +124,7 @@ w <- round(1 / (s^2), digits = 3) weights <- w[factor(x)] m <- lm(y ~ x, w = weights) -calplot(m)
#> Warning: Assuming constant prediction variance even though model fit is weighted
+calplot(m)
#> Warning: Assuming constant prediction variance even though model fit is weighted
# The following concords with the book p. 200 inverse.predict(m, 15, ws = 1.67) # 5.9 +- 2.5
#> $Prediction #> [1] 5.865367 @@ -194,5 +209,8 @@
+ + + -- cgit v1.2.1