From e23da46d572df2636d68572710b1f2ffbf27b7bd Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Tue, 27 Sep 2016 17:39:28 +0200 Subject: Remove mathjax from README --- .Rbuildignore | 1 + ChangeLog | 22 +++++++++++-- GNUmakefile | 2 +- README.html | 99 +++++++++++++++++++++++++++++++++++++++++++++-------------- README.md | 6 ++++ 5 files changed, 104 insertions(+), 26 deletions(-) diff --git a/.Rbuildignore b/.Rbuildignore index ad9f5bd..cd6957c 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -3,3 +3,4 @@ GNUmakefile README.html sd/* ^test.log$ +^docs$ diff --git a/ChangeLog b/ChangeLog index f6450ed..257e4cc 100644 --- a/ChangeLog +++ b/ChangeLog @@ -1,8 +1,26 @@ -commit f48d2ddb338c3050b3b6ccaed636366a546c5275 +commit b3e6adc8da99f895fa9d289133de60ce1d5bd889 +Author: Johannes Ranke +Date: 2016-09-27 16:43:15 +0200 + + Add a bit of info to README + +commit 1532aadbd632a3b82032de3f0b0f377660617a9f +Author: Johannes Ranke +Date: 2016-09-27 16:14:36 +0200 + + Add pp to the list of classes for staticdocs + +commit 40d06320e097434a924c0d57b26e5e1a7574625c +Author: Johannes Ranke +Date: 2016-09-27 16:11:25 +0200 + + Add staticdocs + +commit 81672751d5b23ed73c9b05bb02c52f0ee854de77 Author: Johannes Ranke Date: 2016-09-27 15:08:20 +0200 - PythonInR (and RDkit) optional, adapt to current webchem + PythonInR optional, adapt to current webchem commit 26748e386a386f8459edb4f061012f099d34de7d Author: Johannes Ranke diff --git a/GNUmakefile b/GNUmakefile index d15273d..5efa49b 100644 --- a/GNUmakefile +++ b/GNUmakefile @@ -45,7 +45,7 @@ $(TGZ): $(pkgfiles) @echo "DONE." README.html: README.md - "$(R_HOME)/bin/Rscript" -e "rmarkdown::render('README.md', output_format = 'html_document')" + "$(R_HOME)/bin/Rscript" -e "rmarkdown::render('README.md')" build: $(TGZ) diff --git a/README.html b/README.html index 046e771..544497c 100644 --- a/README.html +++ b/README.html @@ -10,24 +10,19 @@ + - + - + + - - + - + + + @@ -57,16 +80,44 @@ code { color: inherit; background-color: rgba(0, 0, 0, 0.04); } -img { - max-width:100%; - height: auto; +img { + max-width:100%; + height: auto; +} +.tabbed-pane { + padding-top: 12px; +} +button.code-folding-btn:focus { + outline: none; } + +
+ + + + + + + + + + + + + +

chents

The R package chents provides some utilities for working with chemical entities in R, made available under the GNU public license. This means:

@@ -82,9 +133,20 @@ details. You should have received a copy of the GNU General Public License along with this program. If not, see <http://www.gnu.org/licenses/> +
+

Features

+
    +
  • Some chemical information is retrieved from the PubChem website using the webchem package
    • +
  • If PythonInR is installed and configured, and RDKit is available via PythonInR, some additional chemical information is computed and a 2D graph can be plotted
    • +
  • Additional information can be read from a local .yaml file
    • +
+

Some examples are available from the Reference on github.

+
+ +
- - diff --git a/README.md b/README.md index 2db5787..359feec 100644 --- a/README.md +++ b/README.md @@ -1,3 +1,9 @@ +--- +output: + html_document: + mathjax: null +--- + # chents The R package **chents** provides some utilities for working with chemical -- cgit v1.2.1