context("Generation of chent objects") oct <- chent$new("1-octanol", smiles = "CCCCCCCCO") test_that("We can generate a chent object from SMILES using RDKit", { expect_equivalent(round(oct$mw, 2), 130.23) expect_equal(names(oct$identifier), "X1.octanol") expect_equal(oct$smiles, "CCCCCCCCO") }) test_that("We can add information retrieved from PubChem via webchem", { oct$try_pubchem() expect_equivalent(round(oct$mw, 2), 130.23) ik = "KBPLFHHGFOOTCA-UHFFFAOYSA-N" attr(ik, "source") <- "pubchem" expect_equal(oct$inchikey, ik) smiles <- "CCCCCCCCO" attr(smiles, "source") <- "pubchem" attr(smiles, "type") <- "canonical" expect_equal(oct$smiles, smiles) })