drfit/R, branch v0.6.4Fitting dose-reponse models (consider migration to the drc package)https://cgit.jrwb.de/drfit/atom?h=v0.6.42015-10-07T15:19:21ZMaintenance changes for the release of 0.6.42015-10-07T15:19:21ZJohannes Rankejranke@uni-bremen.de2015-10-07T15:19:21Zurn:sha1:cc66ea8e99f809c53cb5a23430b814f68efdb126Improvements on the EDx calculations in drcfit. However, in cases that there is no 2014-03-18T11:21:20Zrankeranke@d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc2014-03-18T11:21:20Zurn:sha1:ec7e9cce71d3b46a84be7268da1de4b0953d54c6
hormesis in the data, drfit often fails to fit the linlogit model, and drcfit
often fails to find the EDx values.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@100 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
Feature-complete version of the new drfit package that can make use2014-02-25T17:30:01Zrankeranke@d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc2014-02-25T17:30:01Zurn:sha1:35362cfc7c02f12fd9689f68a772a804d895535a
of the drc package in order to obtain confidence intervals for EDx values.
See ChangeLog for details.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@98 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
- Some updates to the packaging2014-02-03T22:04:37Zrankeranke@d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc2014-02-03T22:04:37Zurn:sha1:184aacf1ad5a28b2428633cd1966d6fb881eb3b0
- Add the possibility to calculate EDx values
- see ChangeLog for a full description
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@97 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
- Added the possibility to manipulate axes and plot.frame2008-04-09T11:54:19Zrankeranke@d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc2008-04-09T11:54:19Zurn:sha1:6115b853e95eb316ee5258f8c9d87ac7a3740c38
- Adapted the test to the improved confidence interval fitting
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@93 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
- Releasable version for CRAN2007-11-23T16:19:08Zrankeranke@d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc2007-11-23T16:19:08Zurn:sha1:1066c87b174f2b3df19e54adee1ee435021441c9
- Changed usage of cat() to message() because the latter does not interfere
with Sweave. Left cat() in checkexperiment.R and checksubstance.R
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@92 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
Make drfit compatible with R 2.6.0, checked with prerelease from today2007-10-01T19:17:27Zrankeranke@d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc2007-10-01T19:17:27Zurn:sha1:e6b9164327957c56de221889e396dcbab6fddd31
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@91 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
Now using the "port" algorithm for the model fitting 2007-03-29T11:57:20Zrankeranke@d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc2007-03-29T11:57:20Zurn:sha1:cdd44b9e4f71b05f5bec46e4b12e6bb2567ecc30
by nls, because in some cases it converges when the
default algorithm does not.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@87 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
Fixed the line types in drplot. Now we get different lines 2006-08-28T16:11:37Zrankeranke@d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc2006-08-28T16:11:37Zurn:sha1:d311733c45526f6fe6b5459ffc37d2bbb15f6eae
for different fits (same substance), and plotting for multiple substances
without overlay as needed for drfit-tox works again.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@86 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
Fix for the weibull fitting. Now there is a warning if 2006-08-28T14:07:59Zrankeranke@d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc2006-08-28T14:07:59Zurn:sha1:53005a97d56b43a7901f91781145acf30f8bf250
the log ED 50 can not be found, and the log ED50 is not
reported.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@85 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc