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<title>Check raw data from range of plates or experiments — checkcontrols • drfit</title>
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experiments from a specified database." />
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<h1>Check raw data from range of plates or experiments</h1>
<div class="hidden name"><code>checkcontrols.Rd</code></div>
</div>
<div class="ref-description">
<p>Report control data from a specified range of microtiter plates or
experiments from a specified database.</p>
</div>
<pre class="usage"><span class='fu'>checkcontrols</span>(<span class='kw'>last</span> <span class='kw'>=</span> <span class='fl'>10</span>, <span class='kw'>id</span> <span class='kw'>=</span> <span class='kw'>NULL</span>,
<span class='kw'>db</span> <span class='kw'>=</span> <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span>(<span class='st'>"cytotox"</span>, <span class='st'>"enzymes"</span>, <span class='st'>"ecotox"</span>),
<span class='kw'>celltype</span> <span class='kw'>=</span> <span class='st'>"IPC-81"</span>, <span class='kw'>enzymetype</span> <span class='kw'>=</span> <span class='st'>"AChE"</span>,
<span class='kw'>organism</span> <span class='kw'>=</span> <span class='st'>"Vibrio fischeri"</span>,
<span class='kw'>endpoint</span> <span class='kw'>=</span> <span class='st'>"%"</span>, <span class='kw'>qcc</span> <span class='kw'>=</span> <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span>(<span class='st'>"R"</span>, <span class='st'>"xbar"</span>))</pre>
<h2 class="hasAnchor" id="arguments"><a class="anchor" href="#arguments"></a>Arguments</h2>
<table class="ref-arguments">
<colgroup><col class="name" /><col class="desc" /></colgroup>
<tr>
<th>last</th>
<td><p>If <code>id</code> is not specified, this argument specifies the number of
plates/experiments that should be evaluated. The plates/experiments with
the hightest numbers are selected.</p></td>
</tr>
<tr>
<th>id</th>
<td><p>A numeric vector of integers, specifying the plates or experiments explicitly.</p></td>
</tr>
<tr>
<th>db</th>
<td><p>The database to be used. Currently, the microtiter plate databases
"cytotox", "enzymes" of the UFT Department of Bioorganic Chemistry are
supported, as well as the database of ecotoxicity experiments "ecotox".</p></td>
</tr>
<tr>
<th>celltype</th>
<td><p>Only important if database "cytotox" is used. Data for
"IPC-81", "C6", "NB4", "HeLa", "Jurkat" and "U937" are available.</p></td>
</tr>
<tr>
<th>enzymetype</th>
<td><p>Only important if database "enzymes" is used.
Data for "AChE", "GR" and "GST" are available.</p></td>
</tr>
<tr>
<th>organism</th>
<td><p>Only important if database "ecotox" is used.</p></td>
</tr>
<tr>
<th>endpoint</th>
<td><p>The endpoint that should be used for selecting the data. Only important if
the database "ecotox" is used. Defaults to "%".</p></td>
</tr>
<tr>
<th>qcc</th>
<td><p>The type of quality control charts to be plotted. By default, an R chart
(showing ranges of control values within plates/experiments), and an
xbar chart (showing means) are generated.</p></td>
</tr>
</table>
<h2 class="hasAnchor" id="value"><a class="anchor" href="#value"></a>Value</h2>
<p>The function lists a report and shows two graphs.</p>
<h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2>
<pre class="examples"><div class='input'><span class='kw'>if</span> (<span class='fl'>FALSE</span>) <span class='fu'>checkcontrols</span>(<span class='fl'>15</span>)</div></pre>
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<h2>Contents</h2>
<ul class="nav nav-pills nav-stacked">
<li><a href="#arguments">Arguments</a></li>
<li><a href="#value">Value</a></li>
<li><a href="#examples">Examples</a></li>
</ul>
<h2>Author</h2>
<p>Johannes Ranke
<a href='mailto:jranke@uni-bremen.de'>jranke@uni-bremen.de</a></p>
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