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authorJohannes Ranke <jranke@uni-bremen.de>2023-07-21 08:24:12 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2023-07-21 08:32:32 +0200
commitd04bac001217855b4e9a1490a35bef3325441b55 (patch)
tree26bf1a06d038c796c2dbce21e5867088c555ee06 /docs/reference/index.html
parent0bc79f02e99d719be5dbb96ed1591d46c8373c9f (diff)
Maintenance prompted by email from CRAN
- Fix an improper use of 'packageVersion' - Update .Rbuildignore - Fix a link in the README - Static documentation rebuilt by pkgdown::build_site()
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+<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1.0"><title>Function reference • drfit</title><!-- jquery --><script src="https://cdnjs.cloudflare.com/ajax/libs/jquery/3.4.1/jquery.min.js" integrity="sha256-CSXorXvZcTkaix6Yvo6HppcZGetbYMGWSFlBw8HfCJo=" crossorigin="anonymous"></script><!-- Bootstrap --><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/3.4.1/css/bootstrap.min.css" integrity="sha256-bZLfwXAP04zRMK2BjiO8iu9pf4FbLqX6zitd+tIvLhE=" crossorigin="anonymous"><script src="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/3.4.1/js/bootstrap.min.js" integrity="sha256-nuL8/2cJ5NDSSwnKD8VqreErSWHtnEP9E7AySL+1ev4=" crossorigin="anonymous"></script><!-- bootstrap-toc --><link rel="stylesheet" href="../bootstrap-toc.css"><script src="../bootstrap-toc.js"></script><!-- Font Awesome icons --><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity="sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin="anonymous"><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/v4-shims.min.css" integrity="sha256-wZjR52fzng1pJHwx4aV2AO3yyTOXrcDW7jBpJtTwVxw=" crossorigin="anonymous"><!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.6/clipboard.min.js" integrity="sha256-inc5kl9MA1hkeYUt+EC3BhlIgyp/2jDIyBLS6k3UxPI=" crossorigin="anonymous"></script><!-- headroom.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/headroom.min.js" integrity="sha256-AsUX4SJE1+yuDu5+mAVzJbuYNPHj/WroHuZ8Ir/CkE0=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/jQuery.headroom.min.js" integrity="sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin="anonymous"></script><!-- pkgdown --><link href="../pkgdown.css" rel="stylesheet"><script src="../pkgdown.js"></script><meta property="og:title" content="Function reference"><!-- mathjax --><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/MathJax.js" integrity="sha256-nvJJv9wWKEm88qvoQl9ekL2J+k/RWIsaSScxxlsrv8k=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/config/TeX-AMS-MML_HTMLorMML.js" integrity="sha256-84DKXVJXs0/F8OTMzX4UR909+jtl4G7SPypPavF+GfA=" crossorigin="anonymous"></script><!--[if lt IE 9]>
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<button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target="#navbar" aria-expanded="false">
@@ -67,184 +17,112 @@
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<span class="navbar-brand">
<a class="navbar-link" href="../index.html">drfit</a>
- <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.7.3</span>
+ <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="">0.7.4</span>
</span>
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+ <ul class="nav navbar-nav"><li>
<a href="../reference/index.html">Reference</a>
</li>
- </ul>
- <ul class="nav navbar-nav navbar-right">
-
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+ </ul><ul class="nav navbar-nav navbar-right"></ul></div><!--/.nav-collapse -->
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-
-<div class="row">
+ </header><div class="row">
<div class="contents col-md-9">
<div class="page-header">
<h1>Reference</h1>
</div>
- <table class="ref-index">
-
- <colgroup>
-
- <col class="alias" />
- <col class="title" />
- </colgroup>
-
- <tbody>
- <tr>
- <th colspan="2">
- <h2 id="section-main-functions" class="hasAnchor"><a href="#section-main-functions" class="anchor"></a>Main functions</h2>
+ <table class="ref-index"><colgroup><col class="alias"><col class="title"></colgroup><tbody><tr><th colspan="2">
+ <h2 id="main-functions">Main functions <a href="#main-functions" class="anchor" aria-hidden="true"></a></h2>
<p class="section-desc"></p>
</th>
- </tr>
- <tr>
-
- <td>
+ </tr></tbody><tbody><tr><td>
<p><code><a href="drfit.html">drfit()</a></code> </p>
</td>
<td><p>Fit dose-response models</p></td>
- </tr><tr>
-
- <td>
+ </tr><tr><td>
<p><code><a href="drcfit.html">drcfit()</a></code> </p>
</td>
<td><p>Fit dose-response models using the drc package</p></td>
- </tr><tr>
-
- <td>
+ </tr><tr><td>
<p><code><a href="drplot.html">drplot()</a></code> </p>
</td>
<td><p>Plot dose-response models</p></td>
- </tr>
- </tbody><tbody>
- <tr>
- <th colspan="2">
- <h2 id="section-get-and-check-data-from-a-drfit-database" class="hasAnchor"><a href="#section-get-and-check-data-from-a-drfit-database" class="anchor"></a>Get and check data from a drfit database</h2>
- <p class="section-desc"><p>These functions only work if you have such a database</p></p>
+ </tr></tbody><tbody><tr><th colspan="2">
+ <h2 id="get-and-check-data-from-a-drfit-database">Get and check data from a drfit database <a href="#get-and-check-data-from-a-drfit-database" class="anchor" aria-hidden="true"></a></h2>
+ <p class="section-desc"></p><p>These functions only work if you have such a database</p>
</th>
- </tr>
- <tr>
-
- <td>
+ </tr></tbody><tbody><tr><td>
<p><code><a href="checkcontrols.html">checkcontrols()</a></code> </p>
</td>
<td><p>Check raw data from range of plates or experiments</p></td>
- </tr><tr>
-
- <td>
+ </tr><tr><td>
<p><code><a href="checkexperiment.html">checkplate()</a></code> <code><a href="checkexperiment.html">checkexperiment()</a></code> </p>
</td>
<td><p>Check raw data from a specified experiment or microtiter plate</p></td>
- </tr><tr>
-
- <td>
+ </tr><tr><td>
<p><code><a href="drdata.html">drdata()</a></code> </p>
</td>
<td><p>Get dose-response data via RODBC</p></td>
- </tr>
- </tbody><tbody>
- <tr>
- <th colspan="2">
- <h2 id="section-datasets-and-example-evaluations" class="hasAnchor"><a href="#section-datasets-and-example-evaluations" class="anchor"></a>Datasets and example evaluations</h2>
+ </tr></tbody><tbody><tr><th colspan="2">
+ <h2 id="datasets-and-example-evaluations">Datasets and example evaluations <a href="#datasets-and-example-evaluations" class="anchor" aria-hidden="true"></a></h2>
<p class="section-desc"></p>
</th>
- </tr>
- <tr>
-
- <td>
+ </tr></tbody><tbody><tr><td>
<p><code><a href="antifoul.html">antifoul</a></code> </p>
</td>
<td><p>Dose-Response data for TBT and Zink Pyrithione in IPC-81 cells</p></td>
- </tr><tr>
-
- <td>
+ </tr><tr><td>
<p><code><a href="IM1xIPC81.html">IM1xIPC81</a></code> </p>
</td>
<td><p>Dose-Response data for 1-methyl-3-alkylimidazolium tetrafluoroborates in IPC-81 cells</p></td>
- </tr><tr>
-
- <td>
+ </tr><tr><td>
<p><code><a href="IM1xVibrio.html">IM1xVibrio</a></code> </p>
</td>
<td><p>Dose-Response data for 1-methyl-3-alkylimidazolium tetrafluoroborates in V. fischeri</p></td>
- </tr><tr>
-
- <td>
+ </tr><tr><td>
<p><code><a href="pyrithione.html">pyrithione</a></code> </p>
</td>
<td><p>Cytotoxicity data for different pyrithionates and related species</p></td>
- </tr><tr>
-
- <td>
+ </tr><tr><td>
<p><code><a href="XY.html">XY</a></code> </p>
</td>
<td><p>Dose-Response data for two substances X and Y</p></td>
- </tr>
- </tbody><tbody>
- <tr>
- <th colspan="2">
- <h2 id="section-helper-functions" class="hasAnchor"><a href="#section-helper-functions" class="anchor"></a>Helper functions</h2>
+ </tr></tbody><tbody><tr><th colspan="2">
+ <h2 id="helper-functions">Helper functions <a href="#helper-functions" class="anchor" aria-hidden="true"></a></h2>
<p class="section-desc"></p>
</th>
- </tr>
- <tr>
-
- <td>
+ </tr></tbody><tbody><tr><td>
<p><code><a href="linlogitf.html">linlogitf()</a></code> </p>
</td>
<td><p>Linear-logistic function</p></td>
- </tr>
- </tbody>
- </table>
- </div>
+ </tr></tbody></table></div>
- <div class="col-md-3 hidden-xs hidden-sm" id="sidebar">
- <h2>Contents</h2>
- <ul class="nav nav-pills nav-stacked">
- <li><a href="#section-main-functions">Main functions</a></li>
- <li><a href="#section-get-and-check-data-from-a-drfit-database">Get and check data from a drfit database</a></li>
- <li><a href="#section-datasets-and-example-evaluations">Datasets and example evaluations</a></li>
- <li><a href="#section-helper-functions">Helper functions</a></li>
- </ul>
- </div>
+ <div class="col-md-3 hidden-xs hidden-sm" id="pkgdown-sidebar">
+ <nav id="toc" data-toggle="toc" class="sticky-top"><h2 data-toc-skip>Contents</h2>
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+ <footer><div class="copyright">
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