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-rw-r--r--tests/IM1xIPC81.R2
-rw-r--r--tests/IM1xIPC81.Rout.save40
-rw-r--r--tests/IM1xVibrio.R2
-rw-r--r--tests/IM1xVibrio.Rout.save40
-rw-r--r--tests/XY.R2
-rw-r--r--tests/XY.Rout.save26
-rw-r--r--tests/antifoul.R2
-rw-r--r--tests/antifoul.Rout.save16
-rw-r--r--tests/pyrithione.R2
-rw-r--r--tests/pyrithione.Rout.save64
10 files changed, 98 insertions, 98 deletions
diff --git a/tests/IM1xIPC81.R b/tests/IM1xIPC81.R
index 075c84d..52b5653 100644
--- a/tests/IM1xIPC81.R
+++ b/tests/IM1xIPC81.R
@@ -1,4 +1,4 @@
library(drfit)
data(IM1xIPC81)
rIM1xIPC81 <- drfit(IM1xIPC81,linlogit=TRUE)
-rIM1xIPC81
+print(rIM1xIPC81,digits=5)
diff --git a/tests/IM1xIPC81.Rout.save b/tests/IM1xIPC81.Rout.save
index 5d9bcc7..41d4e48 100644
--- a/tests/IM1xIPC81.Rout.save
+++ b/tests/IM1xIPC81.Rout.save
@@ -1,6 +1,6 @@
R : Copyright 2006, The R Foundation for Statistical Computing
-Version 2.3.0 (2006-04-24)
+Version 2.3.1 beta (2006-05-18 r38119)
ISBN 3-900051-07-0
R is free software and comes with ABSOLUTELY NO WARRANTY.
@@ -58,23 +58,23 @@ NaNs produced in: pnorm(q, mean, sd, lower.tail, log.p)
IM1-10 BF4: Fitting data...
Waiting for profiling to be done...
-> rIM1xIPC81
- Substance ndl n lld lhd mtype logED50 2.5%
-1 IM13 BF4 9 81 0.59176003 3.000000 inactive NA NA
-2 IM14 BF4 20 216 -0.01030017 3.176091 no fit NA NA
-3 IM15 BF4 9 135 0.59176003 3.000000 inactive NA NA
-4 IM16 BF4 9 108 0.59176003 3.000000 inactive NA NA
-5 IM17 BF4 9 81 0.59176003 3.000000 linlogit 2.5785719 2.5057219
-6 IM18 BF4 9 135 0.59176003 3.000000 linlogit 1.6806040 1.6229756
-7 IM19 BF4 9 81 0.59176003 3.000000 linlogit 1.6496121 1.5984793
-8 IM1-10 BF4 11 162 -0.01030017 3.000000 linlogit 0.7696961 0.6870081
- 97.5% unit sigma a b c
-1 NA 然 NA NA NA NA
-2 NA 然 NA NA NA NA
-3 NA 然 NA NA NA NA
-4 NA 然 NA NA NA NA
-5 2.6617385 然 0.2375857 2.5785719 2.300216 0.01468034
-6 1.7418917 然 0.2324871 1.6806040 2.237338 0.05719295
-7 1.7031463 然 0.1452716 1.6496121 1.976976 0.10956088
-8 0.8544213 然 0.2987708 0.7696961 1.936253 0.45808611
+> print(rIM1xIPC81,digits=5)
+ Substance ndl n lld lhd mtype logED50 2.5% 97.5% unit
+1 IM13 BF4 9 81 0.591760 3.0000 inactive NA NA NA 然
+2 IM14 BF4 20 216 -0.010300 3.1761 no fit NA NA NA 然
+3 IM15 BF4 9 135 0.591760 3.0000 inactive NA NA NA 然
+4 IM16 BF4 9 108 0.591760 3.0000 inactive NA NA NA 然
+5 IM17 BF4 9 81 0.591760 3.0000 linlogit 2.5786 2.50572 2.66174 然
+6 IM18 BF4 9 135 0.591760 3.0000 linlogit 1.6806 1.62298 1.74189 然
+7 IM19 BF4 9 81 0.591760 3.0000 linlogit 1.6496 1.59848 1.70315 然
+8 IM1-10 BF4 11 162 -0.010300 3.0000 linlogit 0.7697 0.68701 0.85442 然
+ sigma a b c
+1 NA NA NA NA
+2 NA NA NA NA
+3 NA NA NA NA
+4 NA NA NA NA
+5 0.23759 2.5786 2.3002 0.014680
+6 0.23249 1.6806 2.2373 0.057193
+7 0.14527 1.6496 1.9770 0.109561
+8 0.29877 0.7697 1.9363 0.458086
>
diff --git a/tests/IM1xVibrio.R b/tests/IM1xVibrio.R
index ed1a698..8fb23d2 100644
--- a/tests/IM1xVibrio.R
+++ b/tests/IM1xVibrio.R
@@ -1,4 +1,4 @@
library(drfit)
data(IM1xVibrio)
rIM1xVibrio <- drfit(IM1xVibrio)
-rIM1xVibrio
+print(rIM1xVibrio,digits=5)
diff --git a/tests/IM1xVibrio.Rout.save b/tests/IM1xVibrio.Rout.save
index bebdcea..e3df372 100644
--- a/tests/IM1xVibrio.Rout.save
+++ b/tests/IM1xVibrio.Rout.save
@@ -1,6 +1,6 @@
R : Copyright 2006, The R Foundation for Statistical Computing
-Version 2.3.0 (2006-04-24)
+Version 2.3.1 beta (2006-05-18 r38119)
ISBN 3-900051-07-0
R is free software and comes with ABSOLUTELY NO WARRANTY.
@@ -44,23 +44,23 @@ Waiting for profiling to be done...
IM1-10 BF4: Fitting data...
Waiting for profiling to be done...
-> rIM1xVibrio
- Substance ndl n lld lhd mtype logED50 2.5% 97.5%
-1 IM13 BF4 13 22 -5.30103 4.69897 probit 3.9399128 3.8636215 4.0160099
-2 IM14 BF4 12 57 -4.30103 4.69897 probit 3.5442110 3.5030166 3.5855474
-3 IM15 BF4 7 20 -0.30103 4.69897 probit 3.1398488 3.1135935 3.1662394
-4 IM16 BF4 13 30 -4.30103 4.69897 probit 3.1804247 3.1435815 3.2176152
-5 IM17 BF4 10 20 -1.30103 4.69897 probit 2.4317301 2.3680656 2.4951179
-6 IM18 BF4 10 17 -2.30103 2.69897 probit 1.4015187 1.3146736 1.4880647
-7 IM19 BF4 13 22 -5.30103 2.69897 probit 0.7157942 0.6703743 0.7592458
-8 IM1-10 BF4 11 20 -6.30103 2.69897 probit -0.1790307 -0.2569430 -0.1037183
- unit sigma a b
-1 然 0.06302893 3.9399128 0.5763074
-2 然 0.05905375 3.5442110 0.6561300
-3 然 0.02695476 3.1398488 0.5526675
-4 然 0.04514079 3.1804247 0.4881559
-5 然 0.04773317 2.4317301 0.6386547
-6 然 0.05611347 1.4015187 0.8008513
-7 然 0.02956284 0.7157942 0.6969275
-8 然 0.04098662 -0.1790307 0.8019351
+> print(rIM1xVibrio,digits=5)
+ Substance ndl n lld lhd mtype logED50 2.5% 97.5% unit
+1 IM13 BF4 13 22 -5.30103 4.6990 probit 3.93991 3.86362 4.01601 然
+2 IM14 BF4 12 57 -4.30103 4.6990 probit 3.54421 3.50302 3.58555 然
+3 IM15 BF4 7 20 -0.30103 4.6990 probit 3.13985 3.11359 3.16624 然
+4 IM16 BF4 13 30 -4.30103 4.6990 probit 3.18042 3.14358 3.21762 然
+5 IM17 BF4 10 20 -1.30103 4.6990 probit 2.43173 2.36807 2.49512 然
+6 IM18 BF4 10 17 -2.30103 2.6990 probit 1.40152 1.31467 1.48806 然
+7 IM19 BF4 13 22 -5.30103 2.6990 probit 0.71579 0.67037 0.75925 然
+8 IM1-10 BF4 11 20 -6.30103 2.6990 probit -0.17903 -0.25694 -0.10372 然
+ sigma a b
+1 0.063029 3.93991 0.57631
+2 0.059054 3.54421 0.65613
+3 0.026955 3.13985 0.55267
+4 0.045141 3.18042 0.48816
+5 0.047733 2.43173 0.63865
+6 0.056113 1.40152 0.80085
+7 0.029563 0.71579 0.69693
+8 0.040987 -0.17903 0.80194
>
diff --git a/tests/XY.R b/tests/XY.R
index 7e3ecb2..228f736 100644
--- a/tests/XY.R
+++ b/tests/XY.R
@@ -1,4 +1,4 @@
library(drfit)
data(XY)
rXY <- drfit(XY,logit=TRUE,weibull=TRUE,chooseone=FALSE)
-rXY
+print(rXY,digits=5)
diff --git a/tests/XY.Rout.save b/tests/XY.Rout.save
index 9da519f..749e699 100644
--- a/tests/XY.Rout.save
+++ b/tests/XY.Rout.save
@@ -28,17 +28,17 @@ Waiting for profiling to be done...
Waiting for profiling to be done...
Substance Y: Fitting data...
-> rXY
- Substance ndl n lld lhd mtype logED50 2.5% 97.5% unit
-1 Control 1 6 -Inf -Inf inactive NA NA NA mg/L
-2 Substance X 4 12 1 3 probit 2.161905 2.105861 2.214359 mg/L
-3 Substance X 4 12 1 3 logit 2.160948 2.112152 2.207912 mg/L
-4 Substance X 4 12 1 3 weibull 2.174365 NA NA mg/L
-5 Substance Y 4 12 1 3 active NA NA NA mg/L
- sigma a b
-1 NA NA NA
-2 0.04131746 2.161905 0.5061306
-3 0.03758732 2.160948 0.2991424
-4 0.05723870 3.009640 2.0362368
-5 NA NA NA
+> print(rXY,digits=5)
+ Substance ndl n lld lhd mtype logED50 2.5% 97.5% unit sigma
+1 Control 1 6 -Inf -Inf inactive NA NA NA mg/L NA
+2 Substance X 4 12 1 3 probit 2.1619 2.1059 2.2144 mg/L 0.041317
+3 Substance X 4 12 1 3 logit 2.1609 2.1122 2.2079 mg/L 0.037587
+4 Substance X 4 12 1 3 weibull 2.1744 NA NA mg/L 0.057239
+5 Substance Y 4 12 1 3 active NA NA NA mg/L NA
+ a b
+1 NA NA
+2 2.1619 0.50613
+3 2.1609 0.29914
+4 3.0096 2.03624
+5 NA NA
>
diff --git a/tests/antifoul.R b/tests/antifoul.R
index f9c1a9d..ae63391 100644
--- a/tests/antifoul.R
+++ b/tests/antifoul.R
@@ -1,4 +1,4 @@
library(drfit)
data(antifoul)
rantifoul <- drfit(antifoul)
-rantifoul
+print(rantifoul,digits=5)
diff --git a/tests/antifoul.Rout.save b/tests/antifoul.Rout.save
index 9967240..8f1d276 100644
--- a/tests/antifoul.Rout.save
+++ b/tests/antifoul.Rout.save
@@ -1,6 +1,6 @@
R : Copyright 2006, The R Foundation for Statistical Computing
-Version 2.3.0 (2006-04-24)
+Version 2.3.1 beta (2006-05-18 r38119)
ISBN 3-900051-07-0
R is free software and comes with ABSOLUTELY NO WARRANTY.
@@ -26,11 +26,11 @@ Waiting for profiling to be done...
Zn Pyrithion: Fitting data...
Waiting for profiling to be done...
-> rantifoul
- Substance ndl n lld lhd mtype logED50 2.5%
-1 TBT 38 135 -2.709271 2.39794 probit -0.1643560 -0.2650411
-2 Zn Pyrithion 27 81 -2.107210 2.00000 probit -0.3979222 -0.5078291
- 97.5% unit sigma a b
-1 -0.05648615 然 0.1928611 -0.1643560 0.6763882
-2 -0.29156056 然 0.2286560 -0.3979222 0.4169632
+> print(rantifoul,digits=5)
+ Substance ndl n lld lhd mtype logED50 2.5% 97.5% unit
+1 TBT 38 135 -2.7093 2.3979 probit -0.16436 -0.26504 -0.056486 然
+2 Zn Pyrithion 27 81 -2.1072 2.0000 probit -0.39792 -0.50783 -0.291561 然
+ sigma a b
+1 0.19286 -0.16436 0.67639
+2 0.22866 -0.39792 0.41696
>
diff --git a/tests/pyrithione.R b/tests/pyrithione.R
index f05988d..d78492d 100644
--- a/tests/pyrithione.R
+++ b/tests/pyrithione.R
@@ -1,4 +1,4 @@
library(drfit)
data(pyrithione)
rpyr <- drfit(pyrithione,linlogit=TRUE,linlogitWrong=c("MSPT","MSPHI"))
-rpyr
+print(rpyr,digits=5)
diff --git a/tests/pyrithione.Rout.save b/tests/pyrithione.Rout.save
index 553f91b..b9b142d 100644
--- a/tests/pyrithione.Rout.save
+++ b/tests/pyrithione.Rout.save
@@ -1,6 +1,6 @@
R : Copyright 2006, The R Foundation for Statistical Computing
-Version 2.3.0 (2006-04-24)
+Version 2.3.1 beta (2006-05-18 r38119)
ISBN 3-900051-07-0
R is free software and comes with ABSOLUTELY NO WARRANTY.
@@ -67,35 +67,35 @@ TBT: Fitting data...
Waiting for profiling to be done...
NaJ: Fitting data...
-> rpyr
- Substance ndl n lld lhd mtype logED50 2.5%
-1 Na Pyrithion 20 108 -2.107210 2.00000 linlogit -0.3461318 NA
-2 Pyridin 19 161 0.591760 3.69897 inactive NA NA
-3 PyNO 19 81 0.591760 3.69897 no fit NA NA
-4 (PT)2 19 81 -2.408240 2.00000 linlogit -0.4197031 -0.5326102
-5 MSO2P 28 108 -1.709271 3.69897 inactive NA NA
-6 MSPHI 19 81 0.591760 3.69897 probit 3.6625025 3.5548278
-7 PyS 18 80 -0.408240 3.00000 probit 2.6817944 NA
-8 Zn Pyrithion 27 81 -2.107210 2.00000 linlogit -0.4132885 -0.5293327
-9 Cu Pyrithion 19 79 -2.408240 2.00000 linlogit -0.3074717 -0.4753489
-10 Fe Pyrithion 19 81 -2.408240 2.00000 linlogit -0.3534572 -0.5003829
-11 (PyS)2 20 81 -0.408240 3.00000 probit 1.7840499 1.6726792
-12 MSPT 18 108 -0.408240 3.00000 probit 2.1384811 2.0709306
-13 TBT 38 135 -2.709271 2.39794 linlogit -0.1580954 -0.2602139
-14 NaJ 10 108 0.591760 3.30103 inactive NA NA
- 97.5% unit sigma a b c
-1 NA 然 0.20857751 -0.3461318 2.1188272 -0.26698979
-2 NA 然 NA NA NA NA
-3 NA 然 0.09188853 NA NA NA
-4 NA 然 0.20509070 -0.4197031 1.8466994 -0.51508088
-5 NA 然 NA NA NA NA
-6 3.88053203 然 0.12943273 3.6625025 0.4387540 NA
-7 NA 然 0.13401920 2.6817944 0.1250523 NA
-8 -0.29979846 然 0.22877916 -0.4132885 1.7424846 0.61078660
-9 -0.15442805 然 0.24494451 -0.3074717 1.0150649 -0.04897422
-10 -0.21459555 然 0.23383185 -0.3534572 1.1823558 0.02510613
-11 1.88824519 然 0.23298721 1.7840499 0.4098018 NA
-12 2.20511512 然 0.22881257 2.1384811 0.2112625 NA
-13 -0.05045493 然 0.19264079 -0.1580954 1.0406576 -0.02416104
-14 NA 然 NA NA NA NA
+> print(rpyr,digits=5)
+ Substance ndl n lld lhd mtype logED50 2.5% 97.5%
+1 Na Pyrithion 20 108 -2.10721 2.0000 linlogit -0.34613 NA NA
+2 Pyridin 19 161 0.59176 3.6990 inactive NA NA NA
+3 PyNO 19 81 0.59176 3.6990 no fit NA NA NA
+4 (PT)2 19 81 -2.40824 2.0000 linlogit -0.41970 -0.53261 NA
+5 MSO2P 28 108 -1.70927 3.6990 inactive NA NA NA
+6 MSPHI 19 81 0.59176 3.6990 probit 3.66250 3.55483 3.880532
+7 PyS 18 80 -0.40824 3.0000 probit 2.68179 NA NA
+8 Zn Pyrithion 27 81 -2.10721 2.0000 linlogit -0.41329 -0.52933 -0.299798
+9 Cu Pyrithion 19 79 -2.40824 2.0000 linlogit -0.30747 -0.47535 -0.154428
+10 Fe Pyrithion 19 81 -2.40824 2.0000 linlogit -0.35346 -0.50038 -0.214596
+11 (PyS)2 20 81 -0.40824 3.0000 probit 1.78405 1.67268 1.888245
+12 MSPT 18 108 -0.40824 3.0000 probit 2.13848 2.07093 2.205115
+13 TBT 38 135 -2.70927 2.3979 linlogit -0.15810 -0.26021 -0.050455
+14 NaJ 10 108 0.59176 3.3010 inactive NA NA NA
+ unit sigma a b c
+1 然 0.208578 -0.34613 2.11883 -0.266989
+2 然 NA NA NA NA
+3 然 0.091889 NA NA NA
+4 然 0.205091 -0.41970 1.84673 -0.515056
+5 然 NA NA NA NA
+6 然 0.129433 3.66250 0.43875 NA
+7 然 0.134019 2.68179 0.12505 NA
+8 然 0.228779 -0.41329 1.74248 0.610790
+9 然 0.244945 -0.30747 1.01507 -0.048974
+10 然 0.233832 -0.35346 1.18236 0.025107
+11 然 0.232987 1.78405 0.40980 NA
+12 然 0.228813 2.13848 0.21126 NA
+13 然 0.192641 -0.15810 1.04066 -0.024161
+14 然 NA NA NA NA
>

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