diff options
Diffstat (limited to 'man')
| -rw-r--r-- | man/drfit.Rd | 16 | ||||
| -rw-r--r-- | man/drplot.Rd | 11 |
2 files changed, 14 insertions, 13 deletions
diff --git a/man/drfit.Rd b/man/drfit.Rd index afbf40b..fefea85 100644 --- a/man/drfit.Rd +++ b/man/drfit.Rd @@ -69,8 +69,8 @@ \item{results}{ A data frame containing at least one line for each substance. If the data did not show a mean response < 0.5 at the highest dose level, the - modeltype is set to \dQuote(inactive). If the mean response at the lowest - dose is smaller than 0.5, the modeltype is set to \dQuote(active). In + modeltype is set to \dQuote{inactive}. If the mean response at the lowest + dose is smaller than 0.5, the modeltype is set to \dQuote{active}. In both cases, no fitting procedure is carried out. Every successful fit is reported in one line. Parameters of the fitted curves are only reported if the fitted ED50 is not higher than the highest dose. @@ -84,14 +84,14 @@ logED50 is one of the model parameters that is being fitted, and therefore, depending on the argument \code{conf}, a standard deviation \code{std} or a confidence interval \code{conf} is reported for the - logED50. In the case of the \dQuote(weibull) model, \code{a} is a + logED50. In the case of the \dQuote{weibull} model, \code{a} is a location parameter. Parameter \code{b} in the case of the - \dQuote(linlogit) fit is the variable b from the \code{\link{linlogitf}} - function. In the case of \dQuote(probit) fit it is the standard deviation - of the fitted normal distribution, in the case of the \dQuote(logit) fit + \dQuote{linlogit} fit is the variable b from the \code{\link{linlogitf}} + function. In the case of \dQuote{probit} fit it is the standard deviation + of the fitted normal distribution, in the case of the \dQuote{logit} fit it is the \code{scale} parameter in the \code{\link{plogis}} function, - and in the \dQuote(weibull) fit it is the \code{shape} parameter of the - fitted \code{\link{pweibull}} function. Only the \dQuote(linlogit) fit + and in the \dQuote{weibull} fit it is the \code{shape} parameter of the + fitted \code{\link{pweibull}} function. Only the \dQuote{linlogit} fit produces a third parameter \code{c} which is the variable f from the \code{\link{linlogitf}} function.} } diff --git a/man/drplot.Rd b/man/drplot.Rd index 0249476..2f1d4ae 100644 --- a/man/drplot.Rd +++ b/man/drplot.Rd @@ -34,17 +34,18 @@ } \item{ctype}{ This argument decides if horizontal lines are drawn to show the scatter of - the control values (dose = 0, mean response = 1). Defaults to "none", - further allowed values are "std" and "conf" for displaying the standard deviation - of the controls or the confidence interval for the mean of the controls. + the control values (dose = 0), if there are more than three of them. + Defaults to "none", further allowed values are "std" and "conf" for + displaying the standard deviation of the controls or the confidence + interval for the mean of the controls. } \item{path}{ The path where graphic files should be put if any are produced. Defaults to "./" i.e. the current working directory of R. } \item{fileprefix}{ - A string which will form the beginning of each filename, if graphic files are - created. Defaults to "drplot". + A string which will form the beginning of each filename, if graphic files + are created. Defaults to "drplot". } \item{overlay}{ If TRUE, all output will be put into one graph, otherwise a separate graph |