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I had deleted the git commits between 0.6.4 and 0.6.7 while removing
drfit from github, while the latest changes were not pushed to jrwb.de
yet.
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- Checking examples fails if error messages in dr(c)fit stemming from
failed fits are printed
- Delete trailing whitespace
- Update packaging
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git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@103 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@102 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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- Thanks Kurt Hornik for checking for valid html
- This is my first HTML 5 document
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@101 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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is no
hormesis in the data, drfit often fails to fit the linlogit model, and drcfit
often fails to find the EDx values.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@100 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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by drfit and drcfit.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@99 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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of the drc package in order to obtain confidence intervals for EDx values.
See ChangeLog for details.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@98 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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- Add the possibility to calculate EDx values
- see ChangeLog for a full description
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@97 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@96 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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warning messages
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@95 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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the upcoming
R 2.10
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@94 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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- Adapted the test to the improved confidence interval fitting
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@93 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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- Changed usage of cat() to message() because the latter does not interfere
with Sweave. Left cat() in checkexperiment.R and checksubstance.R
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@92 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@91 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@90 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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cause a warning in the upcoming R 2.5.0
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@89 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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(PyS)2 from pyrithione.rda because it is fitted differently
on amd64 and i386 (!).
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@88 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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by nls, because in some cases it converges when the
default algorithm does not.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@87 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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for different fits (same substance), and plotting for multiple substances
without overlay as needed for drfit-tox works again.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@86 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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the log ED 50 can not be found, and the log ED50 is not
reported.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@85 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@84 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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- Fixes in checkplate, checksubstance and checkexperiment
- New arguments ltys, xlab and ylab in drplot, due to a request by
Ewa Mulkiewicz
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@83 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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since it still differed between amd64 and i386.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@82 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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in the last digits between amd64 and i386.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@81 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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starting value for the scale argument. Now all models
get separate starting arguments, with hopefully effective
default values.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@80 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@79 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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unnecessary devices are opened any more
- Adjusted the .Rout.save files to kriemhilds version
(R 2.3.0 from Debian unstable, i386)
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@78 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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of the confidence interval fails
- Updated version of the drfit-Rnews preprint
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@77 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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the function confint.nls from the MASS package is being used,
after stumbling across the relevant paragraph of the MASS book.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@76 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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call from the checkexperiment function, and updated the INDEX.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@75 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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depending on the overlay argument, and set back to the previous value
- Added a test for each datase
- Added a demo for each dataset
- Corrected many small bugs in the documentation and improved formatting
of the .Rd files
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@74 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@73 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@72 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@71 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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problems when calling drplot from Sweave code chunks as well as in JGR.
- drplot: Removed the output with cat, since it may be annoying to receive
a message when a plot was requested
- Small documentation adaptations and fixes
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@70 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@69 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@68 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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to call checkexperiment.R, and fixed DESCRIPTION and INDEX
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@67 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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including documentation, but R CMD check tells me that
"use of NULL environment is deprecated"
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@66 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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to checkexperiment which will also work for the
ecotox database.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@65 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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CRAN on April 6 to the SVN repository.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@64 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@63 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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- Confidence intervals for the EC50 can now (again) be generated by
drfit by giving the argument conf=TRUE
- Update of the INDEX
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@62 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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Added example data IM1xIPC81.
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@61 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
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