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2018-12-12Add whereClause argument to checkexperimentJohannes Ranke1-2/+2
2018-10-11Update ChangeLog and DESCRIPTION to prepare releaseJohannes Ranke1-1/+1
2018-09-15Switch to odbc, reformattting of codeJohannes Ranke1-7/+8
to make it more readable. Also remove outdated hyperlinks from the help files.
2018-06-06Static documentation rebuilt by pkgdown::build_site()Johannes Ranke1-0/+1
2018-03-01Add README.html for cgit.jrwb.de, fix DESCRIPTIONJohannes Ranke1-3/+3
Also improve .Rbuildignore a bit
2017-10-10Add ORCIDJohannes Ranke1-1/+2
2017-07-18Fixed the formula for the control growth rateJohannes Ranke1-1/+1
2017-07-12Improve y axis limitsJohannes Ranke1-1/+1
2017-06-10Document if matching is case-sensitive for substance namesJohannes Ranke1-1/+1
2017-03-31Make RODBC a hard dependency again, ChangeLogJohannes Ranke1-2/+1
2017-03-31Improve spelling to improve CRAN checksJohannes Ranke1-2/+2
2017-03-30Add checkcontrols, updates, see ChangeLogJohannes Ranke1-3/+3
2017-03-24Use https for pkgdownJohannes Ranke1-1/+1
2017-03-24Address NOTES obtained via winbuilderJohannes Ranke1-6/+4
2017-03-24Clean up after the merge of v0.6.7, add check.logJohannes Ranke1-8/+3
2017-03-24Import version 0.6.7 from CRANJohannes Ranke1-9/+15
I had deleted the git commits between 0.6.4 and 0.6.7 while removing drfit from github, while the latest changes were not pushed to jrwb.de yet.
2017-03-24Suppress error messages in dr(c)fit, maintenanceJohannes Ranke1-3/+3
- Checking examples fails if error messages in dr(c)fit stemming from failed fits are printed - Delete trailing whitespace - Update packaging
2015-12-15Fix connecting to the UFT databaseJohannes Ranke1-2/+2
2015-10-07Maintenance changes for the release of 0.6.4v0.6.4Johannes Ranke1-15/+17
2015-07-02Import functions unknown to R CMD check --as-cran in R-develranke1-3/+3
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@103 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2014-07-28Address platform dependence of tests/pyrithione.Rranke1-2/+2
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@102 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2014-03-18Improvements on the EDx calculations in drcfit. However, in cases that there ↵ranke1-1/+1
is no hormesis in the data, drfit often fails to fit the linlogit model, and drcfit often fails to find the EDx values. git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@100 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2014-02-25Feature-complete version of the new drfit package that can make useranke1-4/+5
of the drc package in order to obtain confidence intervals for EDx values. See ChangeLog for details. git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@98 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2014-02-03- Some updates to the packagingranke1-5/+7
- Add the possibility to calculate EDx values - see ChangeLog for a full description git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@97 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2012-12-16Added NAMESPACE and fixed the testsranke1-2/+2
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@96 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2009-10-11Update of the tests to new numerical values at the fourth digit, and new ↵ranke1-2/+2
warning messages git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@95 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2009-10-11Update taking out a link to the package drc that was producing a warning in ↵ranke1-2/+2
the upcoming R 2.10 git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@94 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2008-04-09- Added the possibility to manipulate axes and plot.frameranke1-2/+2
- Adapted the test to the improved confidence interval fitting git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@93 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2007-11-23- Releasable version for CRANranke1-2/+2
- Changed usage of cat() to message() because the latter does not interfere with Sweave. Left cat() in checkexperiment.R and checksubstance.R git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@92 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2007-10-01Make drfit compatible with R 2.6.0, checked with prerelease from todayranke1-4/+5
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@91 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2007-09-21Testranke1-3/+3
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@90 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2007-03-29- Changed "µM" in all datasets to "microM", since non-Ascii charactersranke1-1/+1
cause a warning in the upcoming R 2.5.0 git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@89 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2007-03-29Updated the test results and took out the data for ranke1-1/+1
(PyS)2 from pyrithione.rda because it is fitted differently on amd64 and i386 (!). git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@88 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2007-03-29Now using the "port" algorithm for the model fitting ranke1-2/+2
by nls, because in some cases it converges when the default algorithm does not. git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@87 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-08-28Fixed the line types in drplot. Now we get different lines ranke1-1/+1
for different fits (same substance), and plotting for multiple substances without overlay as needed for drfit-tox works again. git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@86 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-08-28Fix for the weibull fitting. Now there is a warning if ranke1-2/+2
the log ED 50 can not be found, and the log ED50 is not reported. git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@85 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-08-14- New version just published on my websiteranke1-2/+2
- Fixes in checkplate, checksubstance and checkexperiment - New arguments ltys, xlab and ylab in drplot, due to a request by Ewa Mulkiewicz git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@83 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-05-22Make the logit model work again, by setting a sensibleranke1-2/+2
starting value for the scale argument. Now all models get separate starting arguments, with hopefully effective default values. git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@80 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-05-08- Corrected the use of the par() function, so no ranke1-2/+2
unnecessary devices are opened any more - Adjusted the .Rout.save files to kriemhilds version (R 2.3.0 from Debian unstable, i386) git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@78 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-05-05- Fix of the drfit() function for the case that the calculationranke1-2/+2
of the confidence interval fails - Updated version of the drfit-Rnews preprint git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@77 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-05-03Changed the way confidence intervals are being calculated. Nowranke1-4/+4
the function confint.nls from the MASS package is being used, after stumbling across the relevant paragraph of the MASS book. git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@76 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-04-28I also removed the get(getOption("device"))()ranke1-1/+1
call from the checkexperiment function, and updated the INDEX. git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@75 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-04-28- Fixed the drplot function, so the graphics parameter ask is adequately setranke1-2/+2
depending on the overlay argument, and set back to the previous value - Added a test for each datase - Added a demo for each dataset - Corrected many small bugs in the documentation and improved formatting of the .Rd files git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@74 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-04-26Added a note about the user-friendliness of this package.ranke1-1/+1
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@73 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-04-26Fixed the version number.ranke1-1/+1
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@72 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-04-26- drplot: Removed the call to get(getOption("device")), since it causedranke1-2/+2
problems when calling drplot from Sweave code chunks as well as in JGR. - drplot: Removed the output with cat, since it may be annoying to receive a message when a plot was requested - Small documentation adaptations and fixes git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@70 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-04-21Fix the version number again...ranke1-1/+1
git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@68 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-04-21Added the checkplate.R function, which is now just another wayranke1-1/+1
to call checkexperiment.R, and fixed DESCRIPTION and INDEX git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@67 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-04-21Working version of the checkexperiment function, ranke1-2/+2
including documentation, but R CMD check tells me that "use of NULL environment is deprecated" git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@66 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc
2006-04-21Finally committed the version that was submitted to ranke1-2/+2
CRAN on April 6 to the SVN repository. git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@64 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc

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