From 2d0ed946c5738a10dbe6413292738ff6dbf87c5d Mon Sep 17 00:00:00 2001 From: ranke Date: Fri, 16 Sep 2005 15:28:46 +0000 Subject: Added the documentation for the drdata function update. git-svn-id: http://kriemhild.uft.uni-bremen.de/svn/drfit@37 d1b72e20-2ee0-0310-a1c4-ad5adbbefcdc --- DESCRIPTION | 15 ++++++++------- man/drdata.Rd | 9 ++++++++- 2 files changed, 16 insertions(+), 8 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index e59d6c6..a0843bd 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,6 +1,6 @@ Package: drfit -Version: 0.04-34 -Date: 2005-08-02 +Version: 0.04-36 +Date: 2005-09-16 Title: Dose-response data evaluation Author: Johannes Ranke Maintainer: Johannes Ranke @@ -12,11 +12,12 @@ Description: drfit provides basic functions for fitting dose-response curves to distribution (logit fit), of the weibull distribution (weibull fit) and a linear-logistic model ("linlogit" fit), derived from the latter, which is used to describe data showing stimulation at low doses - (hormesis). In addition, functions checking, plotting and retrieving - dose-response data of the UFT Bremen, Department of Bioorganic - Chemistry, are provided. I would be delighted if you would join in - this effort of creating useful and useable tools for dealing with - dose-response data from biological testing. + (hormesis). + In addition, functions checking, plotting and retrieving dose-response data + of the UFT Bremen are provided. + I would be delighted if you would join in this effort of creating useful + and useable tools for dealing with dose-response data from biological + testing. License: GPL version 2 or newer URL: http://www.r-project.org, http://www.uft.uni-bremen.de/chemie/ranke, diff --git a/man/drdata.Rd b/man/drdata.Rd index fe54ffe..3f794bc 100644 --- a/man/drdata.Rd +++ b/man/drdata.Rd @@ -6,7 +6,8 @@ } \usage{ drdata(substances, experimentator = "\%", db = "cytotox", celltype = "IPC-81", - enzymetype="AChE", whereClause = "1", ok = "'ok','no fit'") + enzymetype="AChE", organism="Vibrio fischeri", endpoint="Luminescence", + whereClause = "1", ok = "'ok','no fit'") } \arguments{ \item{substances}{ @@ -23,6 +24,12 @@ Currently, only data for IPC-81, C6, NB4, HeLa, Jurkat and U937 are supported.} \item{enzymetype}{ Currently, only data for AChE, GR and GST are supported.} + \item{organism}{ + The organism that was exposed to the chemical. Only important if the database + "ecotox" is used. Defaults to "Vibrio fischeri".} + \item{endpoint}{ + The endpoint that should be used for selecting the data. Only important if the + database "ecotox" is used. Defaults to "Vibrio fischeri".} \item{whereClause}{ With this argument, additional conditions for the SQL query can be set, e.g. "where plate != 710". The default is 1 (in SQL syntax this means TRUE).} -- cgit v1.2.1