From ae13a2e7f373f697cdfb6acb7ae042d6e27d8967 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Fri, 24 Mar 2017 15:22:07 +0100 Subject: Add pkgdown docu, change package build directory --- docs/reference/antifoul.html | 160 +++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 160 insertions(+) create mode 100644 docs/reference/antifoul.html (limited to 'docs/reference/antifoul.html') diff --git a/docs/reference/antifoul.html b/docs/reference/antifoul.html new file mode 100644 index 0000000..5a2b886 --- /dev/null +++ b/docs/reference/antifoul.html @@ -0,0 +1,160 @@ + + + + + + + + +Dose-Response data for TBT and Zink Pyrithione in IPC-81 cells — antifoul • drfit + + + + + + + + + + + + + + + + + + + + + + + + + + +
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Dose-Response data for TBT and Zink Pyrithione in IPC-81 cells

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This data set shows the response of the rat leukaemic cell line IPC-81 to + dilution series of tributyltin chloride (TBT) and Zink Pyrithione as retrieved + from the "cytotox" database of the UFT Department of Bioorganic Chemistry on + February 25, 2004

+ + + 
data(antifoul)
+ +

Format

+ +

A dataframe containing 135 and 81 data points for concentrations and responses + for TBT and Zink Pyrithione, respectively. Some additional columns from the + database are also present.

+ +

Source

+ +

http://www.uft.uni-bremen.de/chemie

+ + +

Examples

+ 
rantifoul.ED50 <- drfit(antifoul,
+                        linlogit = TRUE, logit = TRUE, weibull = TRUE,
+                        chooseone = FALSE,
+                        showED50 = TRUE, EDx = c(10))
#> 
+#> TBT: Fitting data...
#> Waiting for profiling to be done...
#> Waiting for profiling to be done...
#> Waiting for profiling to be done...
#> 
+#> Zn Pyrithion: Fitting data...
#> Waiting for profiling to be done...
#> Waiting for profiling to be done...
#> Waiting for profiling to be done...
print(rantifoul.ED50, digits = 5)
#>      Substance ndl   n     lld    lhd    mtype  logED50     2.5%     97.5%
+#> 1          TBT  38 135 -2.7093 2.3979 linlogit -0.15809 -0.26021 -0.050475
+#> 2          TBT  38 135 -2.7093 2.3979   probit -0.16436 -0.26504 -0.056498
+#> 3          TBT  38 135 -2.7093 2.3979    logit -0.16012 -0.26116 -0.052591
+#> 4          TBT  38 135 -2.7093 2.3979  weibull -0.11507       NA        NA
+#> 5 Zn Pyrithion  27  81 -2.1072 2.0000 linlogit -0.41329 -0.52932 -0.299799
+#> 6 Zn Pyrithion  27  81 -2.1072 2.0000   probit -0.39792 -0.50783 -0.291563
+#> 7 Zn Pyrithion  27  81 -2.1072 2.0000    logit -0.40035 -0.51049 -0.293501
+#> 8 Zn Pyrithion  27  81 -2.1072 2.0000  weibull -0.38795       NA        NA
+#>     unit   sigma        a       b         c    ED50 ED50 2.5% ED50 97.5%
+#> 1 microM 0.19264 -0.15809 1.04065 -0.024165 0.69487   0.54927    0.89028
+#> 2 microM 0.19286 -0.16436 0.67637        NA 0.68493   0.54320    0.87801
+#> 3 microM 0.19199 -0.16012 0.41358        NA 0.69164   0.54808    0.88595
+#> 4 microM 0.18810  0.63743 1.28891        NA 0.76724        NA         NA
+#> 5 microM 0.22878 -0.41329 1.74249  0.610810 0.38611   0.29558    0.50142
+#> 6 microM 0.22866 -0.39792 0.41696        NA 0.40002   0.31058    0.51102
+#> 7 microM 0.22802 -0.40035 0.25395        NA 0.39779   0.30868    0.50874
+#> 8 microM 0.23008  0.47647 2.51561        NA 0.40931        NA         NA
+#>      EDx10
+#> 1 0.085214
+#> 2 0.093077
+#> 3 0.085340
+#> 4 0.053392
+#> 5 0.120232
+#> 6 0.116872
+#> 7 0.110068
+#> 8 0.121166

+rantifoul.drc <- drcfit(antifoul,
+                        linlogit = TRUE, logit = TRUE, weibull = TRUE,
+                        chooseone = FALSE,
+                        showED50 = TRUE, EDx = c(10))
#> 
+#> TBT: Fitting data...
#> Error in ED50["1:50", "Lower"]: Indizierung außerhalb der Grenzen
print(rantifoul.drc, digits = 5)
#> Error in print(rantifoul.drc, digits = 5): Objekt 'rantifoul.drc' nicht gefunden
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+ + + -- cgit v1.2.1