Check raw data from a specified experiment or microtiter plate

From fbdd2459014999b89f65678b3e0c348f91e27167 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Fri, 7 Feb 2020 07:50:11 +0100 Subject: Update static documentation --- docs/reference/checkexperiment.html | 76 +++++++++++++++++++++---------------- 1 file changed, 44 insertions(+), 32 deletions(-) (limited to 'docs/reference/checkexperiment.html') diff --git a/docs/reference/checkexperiment.html b/docs/reference/checkexperiment.html index 937b8dc..7acd323 100644 --- a/docs/reference/checkexperiment.html +++ b/docs/reference/checkexperiment.html @@ -1,6 +1,6 @@ - + @@ -8,21 +8,25 @@ Check raw data from a specified experiment or microtiter plate — checkexperiment • drfit + - + - - + + + - + + - + - - + + + @@ -30,16 +34,18 @@ - + + - + + + @@ -55,14 +62,15 @@

@@ -70,7 +78,7 @@ - @@ -88,6 +95,7 @@

@@ -99,15 +107,14 @@

Report metadata from a specified experiment or microtiter plate from a specified database, box plot controls, and plot the dose-response data.

checkplate(id, db = c("cytotox", "enzymes"))
-  checkexperiment(id, db = c("ecotox", "cytotox", "enzymes"), endpoint = "%")

- +

checkplate(id, db = c("cytotox", "enzymes"))
+  checkexperiment(id, db = c("ecotox", "cytotox", "enzymes"), endpoint = "%",
+                  whereClause = "1")

Arguments

@@ -126,44 +133,47 @@ + + + +

The endpoint that should be used for selecting the data. Only important if the database "ecotox" is used. Defaults to "%".
whereClause	With this argument, additional conditions for the SQL query can be set, + e.g. "duration = 48" (i.e. "Only retrieve data with duration 48"). The + default is 1 (in SQL syntax this means TRUE).

- +

Value

The function lists a report and shows two graphs.

Examples

# Check plate number 3 in the cytotox database
-
# NOT RUN {
-checkplate(3)
-# }

# Check plate number 3 in the cytotox database
+if (FALSE) checkplate(3)
+
+# Check data from experiment 1517 with duration 48 hours
+if (FALSE) checkexperiment(1517, whereClause = "duration = 48")

+ @@ -171,6 +181,8 @@ + + -- cgit v1.2.1

Arguments

Value

Examples

Contents

Author