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<h1>Check raw data from a specified experiment or microtiter plate</h1>
<div class="hidden name"><code>checkexperiment.Rd</code></div>
</div>
<div class="ref-description">
<p>Report metadata from a specified experiment or microtiter plate from a
specified database, box plot controls, and plot the dose-response data.</p>
</div>
<div id="ref-usage">
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">checkplate</span><span class="op">(</span><span class="va">id</span>, db <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"cytotox"</span>, <span class="st">"enzymes"</span><span class="op">)</span><span class="op">)</span></span>
<span> <span class="fu">checkexperiment</span><span class="op">(</span><span class="va">id</span>, db <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"ecotox"</span>, <span class="st">"cytotox"</span>, <span class="st">"enzymes"</span><span class="op">)</span>, endpoint <span class="op">=</span> <span class="st">"%"</span>, </span>
<span> whereClause <span class="op">=</span> <span class="st">"1"</span><span class="op">)</span></span></code></pre></div>
</div>
<div id="arguments">
<h2>Arguments</h2>
<dl><dt>id</dt>
<dd><p>The id of the experiment or the plate identifying it within the database.</p></dd>
<dt>db</dt>
<dd><p>The database to be used. Currently, the microtiter plate databases
"cytotox", "enzymes" of the UFT Department of Bioorganic Chemistry are
supported, as well as the database of ecotoxicity experiments "ecotox".</p></dd>
<dt>endpoint</dt>
<dd><p>The endpoint that should be used for selecting the data. Only important if
the database "ecotox" is used. Defaults to "%".</p></dd>
<dt>whereClause</dt>
<dd><p>With this argument, additional conditions for the SQL query can be set,
e.g. "duration = 48" (i.e. "Only retrieve data with duration 48"). The
default is 1 (in SQL syntax this means TRUE).</p></dd>
</dl></div>
<div id="value">
<h2>Value</h2>
<p>The function lists a report and shows two graphs.</p>
</div>
<div id="author">
<h2>Author</h2>
<p>Johannes Ranke
<a href="mailto:jranke@uni-bremen.de">jranke@uni-bremen.de</a></p>
</div>
<div id="ref-examples">
<h2>Examples</h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="co"># Check plate number 3 in the cytotox database</span></span></span>
<span class="r-in"><span><span class="kw">if</span> <span class="op">(</span><span class="cn">FALSE</span><span class="op">)</span> <span class="fu">checkplate</span><span class="op">(</span><span class="fl">3</span><span class="op">)</span></span></span>
<span class="r-in"><span></span></span>
<span class="r-in"><span><span class="co"># Check data from experiment 1517 with duration 48 hours</span></span></span>
<span class="r-in"><span><span class="kw">if</span> <span class="op">(</span><span class="cn">FALSE</span><span class="op">)</span> <span class="fu">checkexperiment</span><span class="op">(</span><span class="fl">1517</span>, whereClause <span class="op">=</span> <span class="st">"duration = 48"</span><span class="op">)</span></span></span>
</code></pre></div>
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