Fixing parameters (initial state and differential equation parameters) now

also works in the experimental GUI



git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@134 edb9625f-4e0d-4859-8d74-9fd3b1da38cb

1 files changed, 12 insertions, 6 deletions

diff --git a/inst/GUI/mkinGUI.R b/inst/GUI/mkinGUI.R
index 281e8b3..b418b42 100644
--- a/inst/GUI/mkinGUI.R
+++ b/inst/GUI/mkinGUI.R
@@ -560,13 +560,19 @@ run_fit <- function() {
   Parameters <- f.gg.parms[,]

   Parameters.de <- subset(Parameters, Type == "deparm")

   deparms <- Parameters.de$Initial

-  names(deparms) <- rownames(Parameters.de)

+  names(deparms) <- Parameters.de$Name

+  defixed <- names(deparms[Parameters.de$Fixed])

+  Parameters.ini <- subset(Parameters, Type == "state")

+  iniparms <- Parameters.ini$Initial

+  names(iniparms) <- sub("_0", "", Parameters.ini$Name)

+  inifixed <- names(iniparms[Parameters.ini$Fixed])

   f[[f.cur]] <<- mkinfit(m[[m.i]], override(ds[[ds.i]]$data),

-                               state.ini = subset(Parameters,

-                                                  Type == "state")$Initial,

-                               solution_type = svalue(f.gg.opts.st),

-                               parms.ini = deparms, 

-                               err = "err")

+                         state.ini = iniparms,

+                         fixed_initials = inifixed,

+                         parms.ini = deparms, 

+                         fixed_parms = defixed,

+                         solution_type = svalue(f.gg.opts.st),

+                         err = "err")

   f[[f.cur]]$ds.index <<- ds.i

   f[[f.cur]]$ds <<- ds[[ds.i]]

   f[[f.cur]]$m.index <<- m.i