Start of the transition to fitting transformed parameters.

Many things are broken now (see TODO list)



git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@20 edb9625f-4e0d-4859-8d74-9fd3b1da38cb

1 files changed, 0 insertions, 23 deletions

diff --git a/R/mkinstart.R b/R/mkinstart.R
deleted file mode 100644
index 46e5bed..0000000
--- a/R/mkinstart.R
+++ /dev/null
@@ -1,23 +0,0 @@
-mkinstart <- function(model, data, mode = "auto")

-{

-  if (class(model) != "mkinmod") stop("The first argument must be a model of class mkinmod")

-  names <- model$parms

-  observed <- names(model$map)

-  if(!all(observed %in% levels(data$name))) stop("The data must contain the observed variables used in the model")

-  for (obs in observed)

-  {

-    tmp <- subset(data, name == obs)

-    max <- tmp[which.max(tmp$value), ]

-    type = names(model$map[[obs]])[[1]]

-    kinmodel <- ifelse(type == "SFORB", "DFOP", type)

-    tmp.longdata <- subset(data, name == obs & time >= max$time)

-    tmp.widedata <- mkin_long_to_wide(tmp.longdata, outtime = "t")

-    names(tmp.widedata) <- c("t", "parent")

-    tmp.fit <- kinfit(

-      kindata = tmp.widedata,

-      kinmodels = kinmodel,

-      parent.0.user = max$value)

-    if(class(tmp.fit[[kinmodel]]) == "try-error") stop(paste("Automatic generation of starting parameters failed\nkinfit failed to find a", kinmodel, "fit for", obs))

-    tmp.results <- kinresults(tmp.fit)

-  }

-}