diff options
Diffstat (limited to 'man')
-rw-r--r-- | man/UBA_model_gallery.Rd | 31 | ||||
-rw-r--r-- | man/gmkinws.Rd | 23 |
2 files changed, 54 insertions, 0 deletions
diff --git a/man/UBA_model_gallery.Rd b/man/UBA_model_gallery.Rd new file mode 100644 index 0000000..619b6bc --- /dev/null +++ b/man/UBA_model_gallery.Rd @@ -0,0 +1,31 @@ +\name{UBA_model_gallery} +\alias{UBA_model_gallery} +\docType{data} +\title{ + A collection of some standard kinetic models +} +\description{ + The UBA model gallery contains predefined kinetic models for some common use + cases, with metabolites named as in the commonly used PELMO degradation + scheme (Jene 1998). Please use the model gallery of the \code{\link{gmkin}} + GUI to see their definitions. The models use the topology of the models + defined by Michael Klein (2010) for DegKinManager, with the exception of the + kinetic sorption model. +} +\usage{data("UBA_model_gallery")} +\format{ + A list containing 9 lists of four \code{\link{mkinmod}} models. +} +\references{ + Klein M (2010) Calculation of rates constants according to FOCUS degradation + kinetics using DegKinManager and ModelMaker. Project report of UBA project + FKZ 360 03 048 + + Jene B (1998) PELMO 3.00 Manual extension, Staatliche Lehr- und + Forschungsanstalt für Landwirtschaft, Weinbau und Gartenbau, D-67435 + Neustadt/Wstr. +} +\examples{ +data(UBA_model_gallery) +} +\keyword{datasets} diff --git a/man/gmkinws.Rd b/man/gmkinws.Rd new file mode 100644 index 0000000..5fab955 --- /dev/null +++ b/man/gmkinws.Rd @@ -0,0 +1,23 @@ +\docType{class} +\name{gmkinws} +\alias{gmkinws} +\title{A workspace class for gmkin} +\format{An \code{\link{R6Class}} generator object.} +\usage{ +gmkinws +} +\description{ +Datasets, models and fits are stored in lists. +} +\section{Fields}{ + +\describe{ +\item{\code{observed}}{Names of the observed variables in the datasets, named +by the names used in the models contained in field m} + +\item{\code{ds}}{A list of datasets compatible with mkinfit (long format)} + +\item{\code{m}}{A list of mkinmod models} + +\item{\code{f}}{A list of mkinfit objects} +}} |