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-rw-r--r--man/UBA_model_gallery.Rd31
-rw-r--r--man/gmkinws.Rd23
2 files changed, 54 insertions, 0 deletions
diff --git a/man/UBA_model_gallery.Rd b/man/UBA_model_gallery.Rd
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+++ b/man/UBA_model_gallery.Rd
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+\name{UBA_model_gallery}
+\alias{UBA_model_gallery}
+\docType{data}
+\title{
+ A collection of some standard kinetic models
+}
+\description{
+ The UBA model gallery contains predefined kinetic models for some common use
+ cases, with metabolites named as in the commonly used PELMO degradation
+ scheme (Jene 1998). Please use the model gallery of the \code{\link{gmkin}}
+ GUI to see their definitions. The models use the topology of the models
+ defined by Michael Klein (2010) for DegKinManager, with the exception of the
+ kinetic sorption model.
+}
+\usage{data("UBA_model_gallery")}
+\format{
+ A list containing 9 lists of four \code{\link{mkinmod}} models.
+}
+\references{
+ Klein M (2010) Calculation of rates constants according to FOCUS degradation
+ kinetics using DegKinManager and ModelMaker. Project report of UBA project
+ FKZ 360 03 048
+
+ Jene B (1998) PELMO 3.00 Manual extension, Staatliche Lehr- und
+ Forschungsanstalt für Landwirtschaft, Weinbau und Gartenbau, D-67435
+ Neustadt/Wstr.
+}
+\examples{
+data(UBA_model_gallery)
+}
+\keyword{datasets}
diff --git a/man/gmkinws.Rd b/man/gmkinws.Rd
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+++ b/man/gmkinws.Rd
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+\docType{class}
+\name{gmkinws}
+\alias{gmkinws}
+\title{A workspace class for gmkin}
+\format{An \code{\link{R6Class}} generator object.}
+\usage{
+gmkinws
+}
+\description{
+Datasets, models and fits are stored in lists.
+}
+\section{Fields}{
+
+\describe{
+\item{\code{observed}}{Names of the observed variables in the datasets, named
+by the names used in the models contained in field m}
+
+\item{\code{ds}}{A list of datasets compatible with mkinfit (long format)}
+
+\item{\code{m}}{A list of mkinmod models}
+
+\item{\code{f}}{A list of mkinfit objects}
+}}

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