From ddbb670efc25dc528d56a01ac6551411d6e24762 Mon Sep 17 00:00:00 2001
From: jranke <jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb>
Date: Wed, 6 Nov 2013 07:37:29 +0000
Subject: Update of the vignettes

git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@140 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
---
 vignettes/examples.Rnw   |   4 +++-
 vignettes/examples.pdf   | Bin 293678 -> 286406 bytes
 vignettes/mkin.Rnw       |   2 +-
 vignettes/mkin.pdf       | Bin 163548 -> 163619 bytes
 vignettes/references.bib |   8 ++++----
 5 files changed, 8 insertions(+), 6 deletions(-)

diff --git a/vignettes/examples.Rnw b/vignettes/examples.Rnw
index 4897f7c..f876d14 100644
--- a/vignettes/examples.Rnw
+++ b/vignettes/examples.Rnw
@@ -20,6 +20,7 @@
 \SweaveOpts{engine=R, eps=FALSE, keep.source = TRUE}
 <<setup, echo = FALSE, results = hide>>=
 options(prompt = "R> ")
+options(width = 70)
 options(SweaveHooks = list(
   cex = function() par(cex.lab = 1.3, cex.axis = 1.3)))
 @
@@ -44,6 +45,7 @@ University of Bremen\\
 
 \tableofcontents
 
+
 \textbf{Key words}: Kinetics, FOCUS, nonlinear optimisation
 
 \section{Kinetic evaluations for parent compounds}
@@ -247,7 +249,7 @@ summary(m.L3.DFOP, data = FALSE)
 @
 
 Here, a look to the model plot, the confidence intervals of the parameters 
-and the correlation matrix suggest that the paramter estimates are reliable, and
+and the correlation matrix suggest that the parameter estimates are reliable, and
 the DFOP model can be used as the best-fit model based on the $\chi^2$ error
 level criterion for laboratory data L3.
 
diff --git a/vignettes/examples.pdf b/vignettes/examples.pdf
index bd01239..ff36191 100644
Binary files a/vignettes/examples.pdf and b/vignettes/examples.pdf differ
diff --git a/vignettes/mkin.Rnw b/vignettes/mkin.Rnw
index 22c9c15..5c71e8b 100644
--- a/vignettes/mkin.Rnw
+++ b/vignettes/mkin.Rnw
@@ -60,7 +60,7 @@ metabolites.
 
 Many approaches are possible regarding the evaluation of chemical degradation
 data.  The \Rpackage{kinfit} package \citep{pkg:kinfit} in \RR{}
-\citep{rcore2012} implements the approach recommended in the kinetics report
+\citep{rcore2013} implements the approach recommended in the kinetics report
 provided by the FOrum for Co-ordination of pesticide fate models and their
 USe \citep{FOCUS2006, FOCUSkinetics2011} for simple data series for one parent
 compound in one compartment.
diff --git a/vignettes/mkin.pdf b/vignettes/mkin.pdf
index 3eebf14..6d7fbfa 100644
Binary files a/vignettes/mkin.pdf and b/vignettes/mkin.pdf differ
diff --git a/vignettes/references.bib b/vignettes/references.bib
index cbd726c..7796000 100644
--- a/vignettes/references.bib
+++ b/vignettes/references.bib
@@ -31,12 +31,12 @@
   url = {http://focus.jrc.ec.europa.eu/dk}
 }
 
-@MANUAL{rcore2012,
+@MANUAL{rcore2013,
   title = {\textsf{R}: A Language and Environment for Statistical Computing},
   author = {{R Development Core Team}},
   organization = {R Foundation for Statistical Computing},
   address = {Vienna, Austria},
-  year = {2012},
+  year = {2013},
   note = {{ISBN} 3-900051-07-0},
   url = {http://www.R-project.org}
 }
@@ -45,7 +45,7 @@
   title = {kinfit: {R}outines for fitting simple kinetic models to chemical
 	degradation data},
   author = {Johannes Ranke},
-  year = {2012},
+  year = {2013},
   url = {http://CRAN.R-project.org}
 }
 
@@ -53,7 +53,7 @@
   title = {mkin: {R}outines for fitting kinetic models with one or more state
 	variables to chemical degradation data},
   author = {Johannes Ranke},
-  year = {2012},
+  year = {2013},
   url = {http://CRAN.R-project.org}
 }
 
-- 
cgit v1.2.1