From e959fde98f95f3595e01490b67892678bbcd1b27 Mon Sep 17 00:00:00 2001
From: Johannes Ranke <jranke@uni-bremen.de>
Date: Wed, 7 May 2014 14:47:28 +0200
Subject: Fork the gmkin GUI from mkin. See ChangeLog for details

---
 man/plot.mkinfit.Rd | 94 -----------------------------------------------------
 1 file changed, 94 deletions(-)
 delete mode 100644 man/plot.mkinfit.Rd

(limited to 'man/plot.mkinfit.Rd')

diff --git a/man/plot.mkinfit.Rd b/man/plot.mkinfit.Rd
deleted file mode 100644
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--- a/man/plot.mkinfit.Rd
+++ /dev/null
@@ -1,94 +0,0 @@
-\name{plot.mkinfit}
-\alias{plot.mkinfit}
-\title{
-  Plot the observed data and the fitted model of an mkinfit object.
-}
-\description{
-  Solves the differential equations with the optimised and fixed parameters
-  from a previous successful call to \code{\link{mkinfit}} and plots 
-  the observed data together with the solution of the fitted model.
-}
-\usage{
-\method{plot}{mkinfit}(x, fit = x,
-  obs_vars = names(fit$mkinmod$map),
-  xlab = "Time", ylab = "Observed", 
-  xlim = range(fit$data$time),
-  ylim = "default",
-  col_obs = 1:length(fit$mkinmod$map), pch_obs = col_obs, 
-  lty_obs = rep(1, length(fit$mkinmod$map)),
-  add = FALSE, legend = !add,
-  show_residuals = FALSE, maxabs = "auto",
-  lpos = "topright", inset = c(0.05, 0.05), \dots)
-}
-\arguments{
-  \item{x}{
-    Alias for fit introduced for compatibility with the generic S3 method.  
-  }
-  \item{fit}{
-    an object of class \code{\link{mkinfit}}.
-  }
-  \item{obs_vars}{
-    A character vector of names of the observed variables for which the 
-    data and the model should be plotted. Defauls to all observed variables
-    in the model.
-  }
-  \item{xlab}{
-    label for the x axis.
-  }
-  \item{ylab}{
-    label for the y axis.
-  }
-  \item{xlim}{
-    plot range in x direction.
-  }
-  \item{ylim}{
-    plot range in y direction.
-  }
-  \item{col_obs}{
-    colors used for plotting the observed data and the corresponding model prediction lines.
-  }
-  \item{pch_obs}{
-    symbols to be used for plotting the data.
-  }
-  \item{lty_obs}{
-    line types to be used for the model predictions.
-  }
-  \item{add}{
-    should the plot be added to an existing plot?
-  }
-  \item{legend}{
-    should a legend be added to the plot?
-  }
-  \item{show_residuals}{
-    should residuals be shown in the lower third of the plot?
-  }
-  \item{maxabs}{
-    Maximum absolute value of the residuals. This is used for the scaling of
-    the y axis and defaults to "auto".
-  }
-  \item{lpos}{
-    position of the legend. Passed to \code{\link{legend}} as the first argument.
-  }
-  \item{inset}{
-    Passed to \code{\link{legend}} if applicable.
-  }
-  \item{\dots}{
-   further arguments passed to \code{\link{plot}}.
-  }
-}
-\value{
-  The function is called for its side effect.
-}
-\examples{
-# One parent compound, one metabolite, both single first order.
-SFO_SFO <- mkinmod(
-  parent = list(type = "SFO", to = "m1", sink = TRUE),
-  m1 = list(type = "SFO"))
-# Fit the model to the FOCUS example dataset D using defaults
-fit <- mkinfit(SFO_SFO, FOCUS_2006_D)
-\dontrun{plot(fit)}
-}
-\author{
-  Johannes Ranke
-}
-\keyword{ hplot }
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