# $Id: mkinerrmin.R 59 2010-07-28 12:29:15Z jranke $ # Copyright (C) 2010 Johannes Ranke # Contact: mkin-devel@lists.berlios.de # This file is part of the R package mkin # mkin is free software: you can redistribute it and/or modify it under the # terms of the GNU General Public License as published by the Free Software # Foundation, either version 3 of the License, or (at your option) any later # version. # This program is distributed in the hope that it will be useful, but WITHOUT # ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS # FOR A PARTICULAR PURPOSE. See the GNU General Public License for more # details. # You should have received a copy of the GNU General Public License along with # this program. If not, see mkinerrmin <- function(errdata, n.parms, alpha = 0.05) { means.mean <- mean(errdata$value_mean, na.rm=TRUE) df = length(errdata$value_mean) - n.parms f <- function(err) { (sum((errdata$value_mean - errdata$value_pred)^2/((err * means.mean)^2)) - qchisq(1 - alpha,df))^2 } err.min <- optimize(f, c(0.01,0.9))$minimum return(list(err.min = err.min, n.optim = n.parms, df = df)) }