kinfit/vignettes, branch master Fitting kinetic models to parent only degradation data https://cgit.jrwb.de/kinfit/atom?h=master 2015-07-03T13:05:18Z More tweaks to kinfit DESCRIPTION to avoid CRAN notes 2015-07-03T13:05:18Z jranke jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb 2015-07-03T13:05:18Z urn:sha1:b1faf820fb8be46689b7358d90aac6d5e74c6722 git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/kinfit@270 edb9625f-4e0d-4859-8d74-9fd3b1da38cb Generate static docs with new DESCRIPTION 2015-07-02T14:44:02Z jranke jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb 2015-07-02T14:44:02Z urn:sha1:379a60b73875869ff1412f52d1ca331ae1bd13d6 git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/kinfit@269 edb9625f-4e0d-4859-8d74-9fd3b1da38cb Vignettes rebuilt by staticdocs, remove empty directory 2015-07-02T12:04:50Z jranke jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb 2015-07-02T12:04:50Z urn:sha1:31cb4f526222015dc0bdd3e12fec04d5099490f7 git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/kinfit@266 edb9625f-4e0d-4859-8d74-9fd3b1da38cb Use Authors@R in DESCRIPTION and update staticdocs using my master branch 2014-12-18T08:43:17Z jranke jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb 2014-12-18T08:43:17Z urn:sha1:8989125097ec810e7fc7a372bc159e28b3e2c867 git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/kinfit@237 edb9625f-4e0d-4859-8d74-9fd3b1da38cb Add makefile for building package and static docs 2014-11-25T08:54:34Z jranke jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb 2014-11-25T08:54:34Z urn:sha1:9130b5071c653e676e20537dbf2b8a3f06a4ef68 git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/kinfit@234 edb9625f-4e0d-4859-8d74-9fd3b1da38cb Remove leftover vignette file, decrease offending precision in test, release 2014-11-24T17:34:36Z jranke jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb 2014-11-24T17:34:36Z urn:sha1:89d95c58070dd70db432ac3f4f03f697ac9fd441 git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/kinfit@232 edb9625f-4e0d-4859-8d74-9fd3b1da38cb Correct name of the DFOP model according to FOCUS kinetics 2014-10-29T12:27:20Z jranke jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb 2014-10-29T12:27:20Z urn:sha1:5aa2dbc7a4939b99165479b222f95f8aad99a8ea git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/kinfit@225 edb9625f-4e0d-4859-8d74-9fd3b1da38cb - Update the TODO list, setting some requirements for version 1.0 2013-04-14T12:42:06Z jranke jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb 2013-04-14T12:42:06Z urn:sha1:f02aa6060666df324be3c28e6a87d37c13cb949c - Check that initial values specified using parms.ini are actually needed for the model, stop otherwise - List all formation fractions in the same place in the summary, also if they were fitted in the model - Include an FOMC model coupled to two metabolites in the unit tests - Some updates needed because of the above - Update of static documentation including the vignettes - Update of the mkin vignettes in the vignettes directory git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/kinfit@82 edb9625f-4e0d-4859-8d74-9fd3b1da38cb Update of vignettes and static HTML documentation 2013-03-05T01:14:54Z jranke jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb 2013-03-05T01:14:54Z urn:sha1:1fc2972a46b281f8e1aa18ff7dbce4dcb9d28865 git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/kinfit@75 edb9625f-4e0d-4859-8d74-9fd3b1da38cb - Completion of the multicompartment part of the mkin examples vignette 2013-02-18T22:11:49Z jranke jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb 2013-02-18T22:11:49Z urn:sha1:52f08978da00d7aaa40794c43a0c7ca8564030ee - Fix to chi2 error level calculation by correctly returning backtransformed parameters as bparms.optim and bparms.fixed - Adaptations of unit tests, summary and plot functions git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/kinfit@67 edb9625f-4e0d-4859-8d74-9fd3b1da38cb