mkin/R, branch v0.9.49.11 Fitting kinetic models to chemical degradation data (also on github) https://cgit.jrwb.de/mkin/atom?h=v0.9.49.11 2020-04-17T23:06:22Z Fix NOTE, prepare for release 2020-04-17T23:06:22Z Johannes Ranke jranke@uni-bremen.de 2020-04-17T23:06:22Z urn:sha1:fe0601aa4c729466e9c4d3219aa6cf1bf0f96955 Avoid assignment to .GlobalEnv for CRAN 2020-04-17T22:38:26Z Johannes Ranke jranke@uni-bremen.de 2020-04-17T22:38:26Z urn:sha1:518a801a9a0f1aef36df1f201b6a3f0f3a84b779 Fix summarizing old objects 2020-04-17T09:21:32Z Johannes Ranke jranke@uni-bremen.de 2020-04-17T09:21:32Z urn:sha1:3e601788eb7393d233d19328a11845130b5b29e5 Add AIC, BIC and log likelihood to summary.mkinfit 2020-04-17T08:31:28Z Johannes Ranke jranke@uni-bremen.de 2020-04-17T08:31:28Z urn:sha1:a1e99257f79afc3cbd1b2df4f2261f5749f6b461 mean_degparms: Fix rownames in random effects 2020-04-16T09:10:25Z Johannes Ranke jranke@uni-bremen.de 2020-04-16T09:10:25Z urn:sha1:5b42ee1eb78ae981a2d45ece36def66925b14324 Adapt endpoint() to also work for nlme.mmkin objects 2020-04-15T18:42:29Z Johannes Ranke jranke@uni-bremen.de 2020-04-15T18:42:29Z urn:sha1:d518c4cfa22994db5ba81a6b01c6cb4c4186872e Include random effects in starting parameters 2020-04-15T17:00:06Z Johannes Ranke jranke@uni-bremen.de 2020-04-15T16:13:04Z urn:sha1:42171ba55222383a0d47e5aacd46a972819e7812 - mean_degparms() now optionally returns starting values for fixed and random effects, which makes it possible to obtain acceptable fits also in more difficult cases (with more parameters) - Fix the anova method, as it is currently not enough to inherit from lme: https://bugs.r-project.org/bugzilla/show_bug.cgi?id=17761 - Show fit information, and per default also errmin information in plot.nlme.mmkin() - Examples for nlme.mmkin: Decrease tolerance and increase the number of iterations in the PNLS step in order to be able to fit FOMC-SFO and DFOP-SFO Show fit information even if show_errmin = FALSE 2020-04-15T07:09:00Z Johannes Ranke jranke@uni-bremen.de 2020-04-15T07:09:00Z urn:sha1:637bd14fed5ab8a615f0d879012f12c59e1532a4 A plot method for nlme.mmkin fits 2020-04-14T23:51:55Z Johannes Ranke jranke@uni-bremen.de 2020-04-14T23:27:02Z urn:sha1:082be7baa35d7e8131a70ca8cc061d90e08fa584 Add a nlme method for mmkin row objects 2020-04-14T15:22:00Z Johannes Ranke jranke@uni-bremen.de 2020-04-14T15:22:00Z urn:sha1:26085403289e29259e500282e8e88a5ab00c07a0