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<title>mkin/docs/articles/FOCUS_L_files, branch v0.9.49.5</title>
<subtitle>Fitting kinetic models to chemical degradation data (also on github)</subtitle>
<id>https://cgit.jrwb.de/mkin/atom?h=v0.9.49.5</id>
<link rel='self' href='https://cgit.jrwb.de/mkin/atom?h=v0.9.49.5'/>
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<updated>2019-06-04T13:09:28Z</updated>
<entry>
<title>Additional algorithm "d_c", more tests, docs</title>
<updated>2019-06-04T13:09:28Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2019-06-04T13:09:28Z</published>
<link rel='alternate' type='text/html' href='https://cgit.jrwb.de/mkin/commit/?id=95178837d3f91e84837628446b5fd468179af2b9'/>
<id>urn:sha1:95178837d3f91e84837628446b5fd468179af2b9</id>
<content type='text'>
The new algorithm tries direct optimization of the likelihood, as well
as a three step procedure. In this way, we consistently get the
model with the highest likelihood for SFO, DFOP and HS for all 12
new test datasets.
</content>
</entry>
<entry>
<title>Improve error model fitting</title>
<updated>2019-05-03T17:14:15Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2019-05-03T17:14:15Z</published>
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<id>urn:sha1:1ef7008be2a72a0847064ad9c2ddcfa16b055482</id>
<content type='text'>
Now we have a three stage fitting process for
nonconstant error models:
- Unweighted least squares
- Only optimize the error model
- Optimize both

Static documentation rebuilt by pkgdown
</content>
</entry>
<entry>
<title>Better initials for error model parameters</title>
<updated>2019-05-02T11:17:05Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2019-05-02T11:17:05Z</published>
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<id>urn:sha1:70591022c07f0e8fb4dd67789b7c8d78af8ebc18</id>
<content type='text'>
- Also make it possible to specify initial values for error model
parameters.
- Run tests
- Rebuild docs
</content>
</entry>
<entry>
<title>Adapt tests, vignettes and examples</title>
<updated>2019-04-10T08:17:35Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2019-04-10T08:17:35Z</published>
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<id>urn:sha1:194659fcaccdd1ee37851725b8c72e99daa3a8cf</id>
<content type='text'>
- Write the NEWS
- Static documentation rebuilt by pkgdown
- Adapt mkinerrmin
- Fix (hopefully all) remaining problems in mkinfit
</content>
</entry>
<entry>
<title>Static documentation rebuilt by pkgdown 1.1.0</title>
<updated>2018-06-05T23:24:15Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2018-06-05T23:24:15Z</published>
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<id>urn:sha1:39b2c2c762b03922a2648b1b226d0f308600cc87</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Another rebuild of the static docs</title>
<updated>2018-03-09T22:14:39Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2018-03-09T22:14:39Z</published>
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<id>urn:sha1:0b677308e3ffbf742880f05cc54da469f3ecc854</id>
<content type='text'>
Now with rbenchmark installed, to get results for the compiled_models
vignette
</content>
</entry>
<entry>
<title>Static documentation rebuilt using current pkgdown::build_site()</title>
<updated>2018-03-01T13:32:46Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2018-03-01T13:32:46Z</published>
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<id>urn:sha1:6653ff2507f45eae909f491a9af3f1eb5358a600</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Convert FOCUS Z vignette to rmarkdown/html</title>
<updated>2017-09-14T10:22:12Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2017-09-14T10:15:58Z</published>
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<id>urn:sha1:f59b8a93a9956ac46eac24d294f7a26642b995dc</id>
<content type='text'>
- Static documentation rebuilt by pkgdown::build_articles()
- DESCRIPTION: Version bump and current date
</content>
</entry>
<entry>
<title>Static documentation rebuilt by pkgdown::build_site()</title>
<updated>2016-10-26T21:18:20Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2016-10-26T21:18:20Z</published>
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</content>
</entry>
<entry>
<title>Static documentation rebuilt by pkgdown::build_site()</title>
<updated>2016-10-06T07:40:35Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2016-10-06T07:40:35Z</published>
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