mkin/docs/reference/mkinfit.html, branch v0.9.50.1Fitting kinetic models to chemical degradation data (also on github)https://cgit.jrwb.de/mkin/atom?h=v0.9.50.12020-05-11T03:18:32ZAvoid merge() and data.frame() in cost function2020-05-11T03:18:32ZJohannes Rankejranke@uni-bremen.de2020-05-11T03:15:19Zurn:sha1:234c9059a95e104917e488a6ddd2313234a96cdc
also for deSolve and eigenvalue based solutions. This noticeably increases
performance for these methods, see test.log and benchmark vignette.
Static documentation rebuilt by pkgdown2020-05-07T06:59:29ZJohannes Rankejranke@uni-bremen.de2020-05-07T06:59:29Zurn:sha1:8bdb4cd437a9d4663e542f95869e8692aa38dadbPrepare release to address failed CRAN check2020-04-20T16:52:52ZJohannes Rankejranke@uni-bremen.de2020-04-20T16:52:52Zurn:sha1:3a62211d9211cd0aedecec055226d66b55a17958Static documentation rebuilt by pkgdown2020-03-30T19:43:10ZJohannes Rankejranke@uni-bremen.de2020-03-30T19:43:10Zurn:sha1:575fcacaa33076de97f41a79afb37efb97ca82e0Fix bug in yesterdays release, add methods for BIC2019-11-01T11:19:03ZJohannes Rankejranke@uni-bremen.de2019-11-01T11:19:03Zurn:sha1:bbb74d4f60033899cd5cdd36aa70f157bc52209eAdd likelihood ratio test and other methods, fixes2019-10-31T00:59:05ZJohannes Rankejranke@uni-bremen.de2019-10-31T00:55:01Zurn:sha1:7091d3738e7e55acb20edb88772b228f6f5b6c98
The likelihood ratio test method is lrtest, in addition,
methods for update and residuals were added.
Static documentation rebuilt by pkgdown2019-10-25T00:10:08ZJohannes Rankejranke@uni-bremen.de2019-10-25T00:10:08Zurn:sha1:af2e1540cdad2fd00bb6216a38a754ff748629adRefactor mkinfit, infrastructure work2019-10-21T10:11:34ZJohannes Rankejranke@uni-bremen.de2019-10-21T10:11:34Zurn:sha1:7624a2b8398b4ad665a3b0b622488e1893a5ee7c
mkinfit objects now include an ll() function to calculate the
log-likelihood. Part of the code was refactored, hopefully making it
easier to read and maintain. IRLS is currently the default algorithm for
the error model "obs", for no particular reason. This may be subject
to change when I get around to investigate.
Slow tests are now in a separate subdirectory and will probably
only be run by my own Makefile target.
Formatting of test logs is improved.
Roundtripping error model parameters works with a precision of 10% when
we use lots of replicates in the synthetic data (see slow tests). This
is not new in this commit, but as I think it is reasonable this
closes #7.
Static documentation rebuilt by pkgdown2019-09-19T10:43:04ZJohannes Rankejranke@uni-bremen.de2019-09-19T10:43:04Zurn:sha1:a7beb73cdfeed34525266d76f424375e1d069a48
Use lazy = TRUE in the pd target for generating pkgdown documentation
Static documentation rebuilt by pkgdown2019-09-18T16:30:21ZJohannes Rankejranke@uni-bremen.de2019-09-18T16:30:21Zurn:sha1:1c7b39f3c542de75a1ba685fec3c154bef8a3301
to check if the link to the pfm package is correctly generated by
pkgdown after preparing the pfm package docs accordingly