mkin/man, branch v0.9-37 Fitting kinetic models to chemical degradation data (also on github) https://cgit.jrwb.de/mkin/atom?h=v0.9-37 2015-06-23T09:57:40Z Fix the changed documentation 2015-06-23T09:57:40Z Johannes Ranke jranke@uni-bremen.de 2015-06-23T09:51:06Z urn:sha1:c21747571ad14fc17a8e73cb0ad39c0ec64856d4 Small documenation changes 2015-06-23T09:40:36Z Johannes Ranke jranke@uni-bremen.de 2015-06-23T09:21:49Z urn:sha1:6c62c42eb57631aa0f4ab7e008621ffb519bd7be Hopefully fix compiling on Solaris, verbose option 2015-06-23T09:17:27Z Johannes Ranke jranke@uni-bremen.de 2015-06-23T09:17:27Z urn:sha1:548b67e5d54e78150cfc6474ad129af9408f4997 - Only declare the time variable in the C code when needed in the derivatives. - Add the option to show verbose output of cfunction() when compiling the model to a shared library. Improve formatting of \dontrun section 2015-06-23T07:31:16Z Johannes Ranke jranke@uni-bremen.de 2015-06-23T07:31:16Z urn:sha1:f47821e831a55716ce045134006df52a0d8c7050 Reorganize transform_odeparms example, reduce check time 2015-06-20T16:38:03Z Johannes Ranke jranke@uni-bremen.de 2015-06-20T16:38:03Z urn:sha1:f0da2e311eb33fa5851956e958e91c25b4da5c1e Low-level generation of compiled models 2015-06-20T01:59:56Z Johannes Ranke jranke@uni-bremen.de 2015-06-19T23:06:24Z urn:sha1:062b9cc1d084e8bb5e552076fc48ade4b3050644 As it is unclear if and when ccSolve will be published on CRAN, the generation, compilation and use of the C version of the system of differential equations was developed for mkin, inspired and guided by the code from the ccSolve package. Many thanks again to Karline Soetaert for all of her work on this and other R packages. Now all model types, including the Hockey-Stick model for the parent compund and the IORE model for parent and/or metabolites can be compiled. Make the examples that are run more quiet 2015-06-05T11:40:02Z Johannes Ranke jranke@uni-bremen.de 2015-06-05T11:40:02Z urn:sha1:2bab93a12caf947387ce34c5a96bba942b2ee317 Include output in README, use mkinsub() in example code 2015-05-19T08:46:30Z Johannes Ranke jranke@uni-bremen.de 2015-05-19T08:46:30Z urn:sha1:e338c9a5a8da42e5f7b8940b96d150752767d75a Make checking faster, testing is done by tests 2015-05-18T14:58:44Z Johannes Ranke jranke@uni-bremen.de 2015-05-18T14:58:44Z urn:sha1:d337a9665d9261d18734d81edc8fe4b569635e71 Merge branch 'master' into compile_odes 2015-05-15T20:00:21Z Johannes Ranke jranke@uni-bremen.de 2015-05-15T20:00:21Z urn:sha1:4cc0da3b67ec78534271eaef23ff2b13abfb86d9