mkin/tests/testthat/_snaps/multistart, branch v1.2.10Fitting kinetic models to chemical degradation data (also on github)https://cgit.jrwb.de/mkin/atom?h=v1.2.102025-02-13T14:46:49ZImprove legend in parplots of multistart objects2025-02-13T14:46:49ZJohannes Rankejohannes.ranke@jrwb.de2025-02-13T14:46:49Zurn:sha1:e8db0cdb378fe4f429f935221c4eb50b178b84a5Update tests without any openblas variant2023-08-17T07:23:27ZJohannes Rankejranke@uni-bremen.de2023-08-17T07:23:27Zurn:sha1:bbed90f6a4010ac0b911ec13c04ae06eebc74bb5
This even a bit faster.
Update platform specific tests on desktop2023-08-17T07:03:53ZJohannes Rankejranke@uni-bremen.de2023-08-17T07:03:53Zurn:sha1:9901675e499226eec6304113eb5ffa3b900942c2Mesotrione data and vignette2023-08-04T11:27:41ZJohannes Rankejranke@uni-bremen.de2023-08-04T11:27:41Zurn:sha1:804a5cb47fcdc823d41c585729ace151b283ca65
The vignette illustrates pH dependent degradation (covariate modelling)
with some detail for the parent compound.
Also, a bug in the saem method of the illparms function was fixed, which
prevented to find ill-defined parameters in cases where e.g. slopes of
covariate models have a negative estimate.
Update tests on 5950x2023-04-01T04:42:00ZJohannes Rankejranke@uni-bremen.de2023-04-01T04:42:00Zurn:sha1:7d5f4cd06b5a3a95a98b345f6b5e1e4ab3526e0a
Update platform dependent test plots
Fix typo in mkinerrmin2023-03-22T21:34:30ZJohannes Rankejranke@uni-bremen.de2023-03-22T21:34:30Zurn:sha1:b17dc3ee5f4fda17fcbc659730cb81e447510121
Thanks to Sebastian Meyer for spotting it.
Some parplot improvements2022-12-06T09:33:24ZJohannes Rankejranke@uni-bremen.de2022-12-06T09:33:24Zurn:sha1:478c6d5eec4c84b22b43adcbdf36888b302ead00
llquant argument, improved legend text, tests
Move two saem fits from setup script to skipped tests2022-11-18T21:11:02ZJohannes Rankejranke@uni-bremen.de2022-11-18T21:11:02Zurn:sha1:5ec8e1bad1aa7d79ee9c19bdd50be07f81a14278
Save winbuilder/CRAN check time...
Make mixed model test data permanent to ensure reproducibility2022-11-18T18:14:47ZJohannes Rankejranke@uni-bremen.de2022-11-18T18:14:47Zurn:sha1:5364f037a72863ef5ba81e14ba4417f68fd389f9
To ensure that tests on different platforms work on the same data, the
mixed modelling test data previosly generated in
tests/testthat/setup_script.R were generated once using the script in
inst/dataset/generation/ds_mixed.R, and are now distributed with the
package.
Pass error.init to saemix_model, show in parplot2022-11-18T07:37:40ZJohannes Rankejranke@uni-bremen.de2022-11-18T07:37:40Zurn:sha1:df0cff4b829f1abf62f037591a24a8019174dd0a
Due to an oversight, error.init was not really passed to saemix_model in
saem.mmkin. The new initial values were reverted to c(1, 1), in order to
avoid changing the test results. Initial values for error model
parameters are now shown in parplot.multistart.