mkin/tests/testthat, branch v0.9.47.1 Fitting kinetic models to chemical degradation data (also on github) https://cgit.jrwb.de/mkin/atom?h=v0.9.47.1 2018-02-06T16:15:22Z Skip some tests on CRAN, more quiet examples 2018-02-06T16:15:22Z Johannes Ranke jranke@uni-bremen.de 2018-02-06T16:15:22Z urn:sha1:9cb1cebc1dcb85b1474b560210bf3939c0dc8da0 Reweighting with two-component error model 2018-01-30T09:43:58Z Johannes Ranke jranke@uni-bremen.de 2018-01-19T15:01:47Z urn:sha1:a37ba8f8898e4629dfc9d2558fc19a180551de2d Static documentation except articles rebuilt by pkgdown Remove this test as results are platform dependent 2017-07-22T14:56:18Z Johannes Ranke jranke@uni-bremen.de 2017-07-22T14:48:11Z urn:sha1:5447af959b2a9b0dc52695bf6a309f346ced085a On my box and winbuilder it was OK, but the CRAN checks show some different behaviour, so the results seem to be too ill-defined for testing for the type of warning. I had skipped this test earlier as it failed on r-forge. Fix test_twa (correct "cores" argument") 2017-07-21T19:50:42Z Johannes Ranke jranke@uni-bremen.de 2017-07-21T19:50:42Z urn:sha1:d7226beed357b5a98ca31dc10859dc3fd2653291 Only use 1 core to pass test on windows 2017-07-21T19:47:04Z Johannes Ranke jranke@uni-bremen.de 2017-07-21T19:47:04Z urn:sha1:e621d0ea24081b3b5b3e324e8fd19422dd60e16f Limit to one core for checks on windows 2017-07-21T14:18:04Z Johannes Ranke jranke@uni-bremen.de 2017-07-21T14:18:04Z urn:sha1:44557703a8f3d04ffe23dab7a398c451b5163faa Fix tests, try FOMC ill-defined again 2017-07-21T14:16:27Z Johannes Ranke jranke@uni-bremen.de 2017-07-21T14:16:01Z urn:sha1:1623d0f0df92e2d4f44faa7a64a0b795e275b444 TWA calculation for SFO, FOMC and DFOP (parent) 2016-12-21T09:35:16Z Johannes Ranke jranke@uni-bremen.de 2016-12-21T09:35:16Z urn:sha1:b847fec686bc1db59079412eb18063d3514ecf75 Skip testing for warning for ill-defined FOMC fits 2016-06-28T06:10:03Z Johannes Ranke jranke@uni-bremen.de 2016-06-28T06:10:03Z urn:sha1:585a1b1d84c8036192f816566e49099392508a62 This caused the test suite to fail on r-forge for v0.9.43, obviously no warning was produced in one of the two expectations Avoid unnecessary stop in edge case, improve warnings 2016-04-21T15:37:54Z Johannes Ranke jranke@uni-bremen.de 2016-04-21T15:34:38Z urn:sha1:0b36fb666b84321814eabbc1a25687ee70d789e6 mkinfit: Do not error out in cases where the fit converges, but the Jacobian for the untransformed model cost can not be estimated. Give a warning instead and return NA for the t-test results. summary.mkinfit: Give a warning message when the covariance matrix can not be obtained. A test has been added to containing such an edge case to check that the warnings are correctly issued and the fit does not terminate.