mkin/tests/testthat, branch v1.2.3Fitting kinetic models to chemical degradation data (also on github)https://cgit.jrwb.de/mkin/atom?h=v1.2.32023-04-16T12:33:14ZSkip another test on CRAN to save CPU cycles2023-04-16T12:33:14ZJohannes Rankejranke@uni-bremen.de2023-04-16T12:33:14Zurn:sha1:2ad43c6f186d582c0f608b0c656267b5d5a0b450Skip the Eigenvalue based saem test2023-04-16T04:22:11ZJohannes Rankejranke@uni-bremen.de2023-04-16T04:19:00Zurn:sha1:76bc0fead33a63168a5e8d77a6c4b82426815d70
It took too long, and this solution method is not recommended. We are
saving 140 seconds here on my system, so more time is saved on travis.
Increase test coverage2023-04-15T18:00:00ZJohannes Rankejranke@uni-bremen.de2023-04-15T18:00:00Zurn:sha1:f215080efba4097ccdaa2d1208edd36c26d7978a
Also, using mkin analytical solutions for more than one observed
variable is not supported (but could be if out_values would be
reordered).
Fix logic in test2023-04-15T14:12:52ZJohannes Rankejranke@uni-bremen.de2023-04-15T14:12:52Zurn:sha1:c1e5f339ff1abccbe4a284cdc9fba3debcb2c586Fix platform dependence in test2023-04-15T13:40:05ZJohannes Rankejranke@uni-bremen.de2023-04-15T13:40:05Zurn:sha1:a71d7a0817f213699e06128c6d1729dc6a7ef76fMake predefined symbols safer2023-04-15T13:35:06ZJohannes Rankejranke@uni-bremen.de2023-04-15T13:35:06Zurn:sha1:b0b710ee9f9bb9bbe9708676d0c5822465e02203
We still need to create a parallel processing cluster _after_ creating a
compiled model that is moved to a user defined location, at least I did
not find another way to make it work. This is not a problem with
parallel processing without a cluster, which is not available on
Windows.
Move preprocessing of DMTA data to the test setup2023-04-15T06:44:51ZJohannes Rankejranke@uni-bremen.de2023-04-15T06:44:51Zurn:sha1:c705a294113ee74a8d408b8b51e4eb2b2822b3a7Update tests on 5950x2023-04-01T04:42:00ZJohannes Rankejranke@uni-bremen.de2023-04-01T04:42:00Zurn:sha1:7d5f4cd06b5a3a95a98b345f6b5e1e4ab3526e0a
Update platform dependent test plots
Fix typo in mkinerrmin2023-03-22T21:34:30ZJohannes Rankejranke@uni-bremen.de2023-03-22T21:34:30Zurn:sha1:b17dc3ee5f4fda17fcbc659730cb81e447510121
Thanks to Sebastian Meyer for spotting it.
Merge branch 'main' into custom_lsoda_call2023-02-13T04:19:08ZJohannes Rankejranke@uni-bremen.de2023-02-13T04:19:08Zurn:sha1:8d1a84ac2190538ed3bac53a303064e281595868