mkin/tests, branch v0.9.49.6 Fitting kinetic models to chemical degradation data (also on github) https://cgit.jrwb.de/mkin/atom?h=v0.9.49.6 2019-10-31T11:44:52Z Increase tolerance of a test for winbuilder 2019-10-31T11:44:52Z Johannes Ranke jranke@uni-bremen.de 2019-10-31T11:44:52Z urn:sha1:70e48e8360875f22970174d409c46cb3f076fa99 - Update DESCRIPTION for release Reorganize tests to reduce time on winbuilder 2019-10-31T10:47:23Z Johannes Ranke jranke@uni-bremen.de 2019-10-31T10:47:23Z urn:sha1:99947961be1cf0a7eed80426bc3d8cc6daa6d106 More plots that are not reproducible on Travis 2019-10-31T01:34:56Z Johannes Ranke jranke@uni-bremen.de 2019-10-31T01:34:56Z urn:sha1:3a628efb59b80c881a1bbea3b2582003a6ddbfa9 Increase numeric tolerance of three tests for Travis 2019-10-31T01:20:56Z Johannes Ranke jranke@uni-bremen.de 2019-10-31T01:20:56Z urn:sha1:59750fd0438ccaa5c6612990660181210f8594f2 Add likelihood ratio test and other methods, fixes 2019-10-31T00:59:05Z Johannes Ranke jranke@uni-bremen.de 2019-10-31T00:55:01Z urn:sha1:7091d3738e7e55acb20edb88772b228f6f5b6c98 The likelihood ratio test method is lrtest, in addition, methods for update and residuals were added. Fix the cutoff for likelihood based intervals 2019-10-28T12:23:40Z Johannes Ranke jranke@uni-bremen.de 2019-10-28T12:23:40Z urn:sha1:bd761d879a95872f82e6d8f893634a61e122a938 The cutoff now matches what is given by Venzon and Moolgavkar (1988). Also, confidence intervals closely match intervals obtained with stats4::confint in the test case where an stats4::mle object is created from the likelihood function in one test case. Static documentation rebuilt by pkgdown Fix checks and tests 2019-10-26T20:52:53Z Johannes Ranke jranke@uni-bremen.de 2019-10-26T20:52:53Z urn:sha1:6e5630a0df7e857697ff2ce4730a5f7f45b67377 Static documentation rebuilt by pkgdown Address some check and test failures 2019-10-26T20:38:11Z Johannes Ranke jranke@uni-bremen.de 2019-10-26T20:38:11Z urn:sha1:cb03bf1fb1e6326f06029969663f3399af96b05d parms and confint methods 2019-10-26T18:50:09Z Johannes Ranke jranke@uni-bremen.de 2019-10-26T18:50:09Z urn:sha1:7b7729694363515007193d1c3e29e9b76271abb3 The confint method can do profile likelihood based confidence intervals! Use roxygen for functions and methods 2019-10-25T00:03:54Z Johannes Ranke jranke@uni-bremen.de 2019-10-24T22:37:42Z urn:sha1:0a3eb0893cb4bd1b12f07a79069d1c7f5e991495