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<title>mkin/tests, branch v0.9.49.7</title>
<subtitle>Fitting kinetic models to chemical degradation data (also on github)</subtitle>
<id>https://cgit.jrwb.de/mkin/atom?h=v0.9.49.7</id>
<link rel='self' href='https://cgit.jrwb.de/mkin/atom?h=v0.9.49.7'/>
<link rel='alternate' type='text/html' href='https://cgit.jrwb.de/mkin/'/>
<updated>2019-11-01T11:45:29Z</updated>
<entry>
<title>Update link, increase tolerance of a test for Travis</title>
<updated>2019-11-01T11:45:29Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2019-11-01T11:45:29Z</published>
<link rel='alternate' type='text/html' href='https://cgit.jrwb.de/mkin/commit/?id=e7c65ee913d4a84da0957d2ebb89abfbc444de56'/>
<id>urn:sha1:e7c65ee913d4a84da0957d2ebb89abfbc444de56</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Fix bug in yesterdays release, add methods for BIC</title>
<updated>2019-11-01T11:19:03Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2019-11-01T11:19:03Z</published>
<link rel='alternate' type='text/html' href='https://cgit.jrwb.de/mkin/commit/?id=bbb74d4f60033899cd5cdd36aa70f157bc52209e'/>
<id>urn:sha1:bbb74d4f60033899cd5cdd36aa70f157bc52209e</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Increase tolerance of a test for winbuilder</title>
<updated>2019-10-31T11:44:52Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2019-10-31T11:44:52Z</published>
<link rel='alternate' type='text/html' href='https://cgit.jrwb.de/mkin/commit/?id=70e48e8360875f22970174d409c46cb3f076fa99'/>
<id>urn:sha1:70e48e8360875f22970174d409c46cb3f076fa99</id>
<content type='text'>
- Update DESCRIPTION for release
</content>
</entry>
<entry>
<title>Reorganize tests to reduce time on winbuilder</title>
<updated>2019-10-31T10:47:23Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2019-10-31T10:47:23Z</published>
<link rel='alternate' type='text/html' href='https://cgit.jrwb.de/mkin/commit/?id=99947961be1cf0a7eed80426bc3d8cc6daa6d106'/>
<id>urn:sha1:99947961be1cf0a7eed80426bc3d8cc6daa6d106</id>
<content type='text'>
</content>
</entry>
<entry>
<title>More plots that are not reproducible on Travis</title>
<updated>2019-10-31T01:34:56Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2019-10-31T01:34:56Z</published>
<link rel='alternate' type='text/html' href='https://cgit.jrwb.de/mkin/commit/?id=3a628efb59b80c881a1bbea3b2582003a6ddbfa9'/>
<id>urn:sha1:3a628efb59b80c881a1bbea3b2582003a6ddbfa9</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Increase numeric tolerance of three tests for Travis</title>
<updated>2019-10-31T01:20:56Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2019-10-31T01:20:56Z</published>
<link rel='alternate' type='text/html' href='https://cgit.jrwb.de/mkin/commit/?id=59750fd0438ccaa5c6612990660181210f8594f2'/>
<id>urn:sha1:59750fd0438ccaa5c6612990660181210f8594f2</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Add likelihood ratio test and other methods, fixes</title>
<updated>2019-10-31T00:59:05Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2019-10-31T00:55:01Z</published>
<link rel='alternate' type='text/html' href='https://cgit.jrwb.de/mkin/commit/?id=7091d3738e7e55acb20edb88772b228f6f5b6c98'/>
<id>urn:sha1:7091d3738e7e55acb20edb88772b228f6f5b6c98</id>
<content type='text'>
The likelihood ratio test method is lrtest, in addition,
methods for update and residuals were added.
</content>
</entry>
<entry>
<title>Fix the cutoff for likelihood based intervals</title>
<updated>2019-10-28T12:23:40Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2019-10-28T12:23:40Z</published>
<link rel='alternate' type='text/html' href='https://cgit.jrwb.de/mkin/commit/?id=bd761d879a95872f82e6d8f893634a61e122a938'/>
<id>urn:sha1:bd761d879a95872f82e6d8f893634a61e122a938</id>
<content type='text'>
The cutoff now matches what is given by Venzon and Moolgavkar (1988).
Also, confidence intervals closely match intervals obtained with
stats4::confint in the test case where an stats4::mle object
is created from the likelihood function in one test case.

Static documentation rebuilt by pkgdown
</content>
</entry>
<entry>
<title>Fix checks and tests</title>
<updated>2019-10-26T20:52:53Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2019-10-26T20:52:53Z</published>
<link rel='alternate' type='text/html' href='https://cgit.jrwb.de/mkin/commit/?id=6e5630a0df7e857697ff2ce4730a5f7f45b67377'/>
<id>urn:sha1:6e5630a0df7e857697ff2ce4730a5f7f45b67377</id>
<content type='text'>
Static documentation rebuilt by pkgdown
</content>
</entry>
<entry>
<title>Address some check and test failures</title>
<updated>2019-10-26T20:38:11Z</updated>
<author>
<name>Johannes Ranke</name>
<email>jranke@uni-bremen.de</email>
</author>
<published>2019-10-26T20:38:11Z</published>
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<id>urn:sha1:cb03bf1fb1e6326f06029969663f3399af96b05d</id>
<content type='text'>
</content>
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