mkin/vignettes, branch v0.9-36 Fitting kinetic models to chemical degradation data (also on github) https://cgit.jrwb.de/mkin/atom?h=v0.9-36 2015-06-21T13:23:20Z Do the t-test for untransformed parameters 2015-06-21T13:23:20Z Johannes Ranke jranke@uni-bremen.de 2015-06-20T23:46:51Z urn:sha1:6733555d7a9315c55001770bacc4c61c4d4f39d5 Low-level generation of compiled models 2015-06-20T01:59:56Z Johannes Ranke jranke@uni-bremen.de 2015-06-19T23:06:24Z urn:sha1:062b9cc1d084e8bb5e552076fc48ade4b3050644 As it is unclear if and when ccSolve will be published on CRAN, the generation, compilation and use of the C version of the system of differential equations was developed for mkin, inspired and guided by the code from the ccSolve package. Many thanks again to Karline Soetaert for all of her work on this and other R packages. Now all model types, including the Hockey-Stick model for the parent compund and the IORE model for parent and/or metabolites can be compiled. FOCUS D vignette generated from Makefile 2015-06-05T12:24:59Z Johannes Ranke jranke@uni-bremen.de 2015-06-05T12:24:59Z urn:sha1:6281424beafe531c9891670c3227ab12e9a21990 Add a simple vignette with an evaluation of FOCUS D 2015-06-05T11:41:44Z Johannes Ranke jranke@uni-bremen.de 2015-06-05T11:41:44Z urn:sha1:58f46265cec1c3f51a6d2507e0f3e3b59243cc82 Merge branch 'master' into compile_odes 2015-05-15T11:55:19Z Johannes Ranke jranke@uni-bremen.de 2015-05-15T11:55:19Z urn:sha1:6c65cba39dbca98caf3f8e69552b3454ec1721fc Conflicts (resolved manually, deleting code that I had integrated into the RUnit tests for testing the compiled version): .gitignore DESCRIPTION inst/unitTests/runit.mkinerrmin.R inst/unitTests/runit.mkinfit.R tests/testthat/test_mkinpredict_SFO_SFO.R vignettes/FOCUS_L.html Update of vignettes during staticdoc documentation 2015-05-15T11:31:28Z Johannes Ranke jranke@uni-bremen.de 2015-05-15T11:31:28Z urn:sha1:89cd81cf47c9f05831e854d5185b5cc599745db4 Add a vignette showing the performance of compiled models 2015-04-17T22:06:38Z Johannes Ranke jranke@uni-bremen.de 2015-04-17T22:06:38Z urn:sha1:a26b44d15c11ebb41083fc2efab0cc91a027b55b Pending commit of an updated vignette 2015-04-16T07:53:58Z Johannes Ranke jranke@uni-bremen.de 2015-04-16T07:53:58Z urn:sha1:d34e5c053794a08cc73c9042ccccfb334ae0f62d Updated vignettes during staticdoc generation 2014-12-18T08:58:32Z Johannes Ranke jranke@uni-bremen.de 2014-12-18T08:58:32Z urn:sha1:ab654b1124281f3308fcf152da93da57e0d2b83e Update date and static docs for release to CRAN 2014-11-21T18:34:56Z Johannes Ranke jranke@uni-bremen.de 2014-11-21T18:34:56Z urn:sha1:b37e5573c22c3a28014e17699a2ad7c0a958c662