path: root/test.log

Loading mkin
Testing mkin
✔ |  OK F W S | Context
✔ |   2       | Export dataset for reading into CAKE
✔ |  13       | Results for FOCUS D established in expertise for UBA (Ranke 2014) [3.5 s]
✔ |   4       | Calculation of FOCUS chi2 error levels [2.2 s]
✔ |   4       | Fitting the SFORB model [1.7 s]
✔ |   5       | Calculation of Akaike weights
✔ |  10       | Confidence intervals and p-values [9.4 s]
✔ |  14       | Error model fitting [37.5 s]
✔ |   6       | Test fitting the decline of metabolites from their maximum [0.8 s]
✔ |   1       | Fitting the logistic model [0.9 s]
✔ |   1       | Test dataset class mkinds used in gmkin
✔ |  12       | Special cases of mkinfit calls [2.3 s]
✔ |   9       | mkinmod model generation and printing [0.2 s]
✔ |   3       | Model predictions with mkinpredict [0.3 s]
✔ |  16       | Evaluations according to 2015 NAFTA guidance [4.1 s]
✖ |   0 1     | Nonlinear mixed-effects models [1.3 s]
────────────────────────────────────────────────────────────────────────────────
test_nlme.R:37: error: nlme_function works correctly
konnte Funktion "nlme_f" nicht finden
Backtrace:
 1. nlme::nlme(...) tests/testthat/test_nlme.R:37:2
 2. nlme::nlme.formula(...)
 3. [ base::eval(...) ] with 1 more call
 5. [ base::eval(...) ] with 1 more call
────────────────────────────────────────────────────────────────────────────────
✔ |   4       | Calculation of maximum time weighted average concentrations (TWAs) [2.2 s]
✔ |   3       | Summary
✔ |  11       | Plotting [0.6 s]
✔ |   4       | AIC calculation
✔ |   2       | Residuals extracted from mkinfit models
✔ |   2       | Complex test case from Schaefer et al. (2007) Piacenza paper [5.3 s]
✔ |   1       | Summaries of old mkinfit objects
✔ |   4       | Results for synthetic data established in expertise for UBA (Ranke 2014) [7.0 s]
✔ |   7     1 | Hypothesis tests [31.9 s]
────────────────────────────────────────────────────────────────────────────────
test_tests.R:60: skip: We can do a likelihood ratio test using an update specification
Reason: This errors out if called by testthat while it works in a normal R session
────────────────────────────────────────────────────────────────────────────────

══ Results ═════════════════════════════════════════════════════════════════════
Duration: 111.4 s

OK:       138
Failed:   1
Warnings: 0
Skipped:  1