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<body>
<h1>Laboratory Data L1</h1>
<p>The following code defines example dataset L1 from the FOCUS kinetics
report, p. 284:</p>
<pre><code class="r">library("mkin", quietly = TRUE)
FOCUS_2006_L1 = data.frame(
t = rep(c(0, 1, 2, 3, 5, 7, 14, 21, 30), each = 2),
parent = c(88.3, 91.4, 85.6, 84.5, 78.9, 77.6,
72.0, 71.9, 50.3, 59.4, 47.0, 45.1,
27.7, 27.3, 10.0, 10.4, 2.9, 4.0))
FOCUS_2006_L1_mkin <- mkin_wide_to_long(FOCUS_2006_L1)
</code></pre>
<p>Here we use the assumptions of simple first order (SFO), the case of declining
rate constant over time (FOMC) and the case of two different phases of the
kinetics (DFOP). For a more detailed discussion of the models, please see the
FOCUS kinetics report.</p>
<p>Since mkin version 0.9-32 (July 2014), we can use shorthand notation like <code>"SFO"</code>
for parent only degradation models. The following two lines fit the model and
produce the summary report of the model fit. This covers the numerical analysis
given in the FOCUS report.</p>
<pre><code class="r">m.L1.SFO <- mkinfit("SFO", FOCUS_2006_L1_mkin, quiet = TRUE)
summary(m.L1.SFO)
</code></pre>
<pre><code>## mkin version: 0.9.46.3
## R version: 3.4.3
## Date of fit: Thu Mar 1 14:24:54 2018
## Date of summary: Thu Mar 1 14:24:54 2018
##
## Equations:
## d_parent/dt = - k_parent_sink * parent
##
## Model predictions using solution type analytical
##
## Fitted with method Port using 37 model solutions performed in 0.24 s
##
## Weighting: none
##
## Starting values for parameters to be optimised:
## value type
## parent_0 89.85 state
## k_parent_sink 0.10 deparm
##
## Starting values for the transformed parameters actually optimised:
## value lower upper
## parent_0 89.850000 -Inf Inf
## log_k_parent_sink -2.302585 -Inf Inf
##
## Fixed parameter values:
## None
##
## Optimised, transformed parameters with symmetric confidence intervals:
## Estimate Std. Error Lower Upper
## parent_0 92.470 1.36800 89.570 95.370
## log_k_parent_sink -2.347 0.04057 -2.433 -2.261
##
## Parameter correlation:
## parent_0 log_k_parent_sink
## parent_0 1.0000 0.6248
## log_k_parent_sink 0.6248 1.0000
##
## Residual standard error: 2.948 on 16 degrees of freedom
##
## Backtransformed parameters:
## Confidence intervals for internally transformed parameters are asymmetric.
## t-test (unrealistically) based on the assumption of normal distribution
## for estimators of untransformed parameters.
## Estimate t value Pr(>t) Lower Upper
## parent_0 92.47000 67.58 2.170e-21 89.57000 95.3700
## k_parent_sink 0.09561 24.65 1.867e-14 0.08773 0.1042
##
## Chi2 error levels in percent:
## err.min n.optim df
## All data 3.424 2 7
## parent 3.424 2 7
##
## Resulting formation fractions:
## ff
## parent_sink 1
##
## Estimated disappearance times:
## DT50 DT90
## parent 7.249 24.08
##
## Data:
## time variable observed predicted residual
## 0 parent 88.3 92.471 -4.1710
## 0 parent 91.4 92.471 -1.0710
## 1 parent 85.6 84.039 1.5610
## 1 parent 84.5 84.039 0.4610
## 2 parent 78.9 76.376 2.5241
## 2 parent 77.6 76.376 1.2241
## 3 parent 72.0 69.412 2.5884
## 3 parent 71.9 69.412 2.4884
## 5 parent 50.3 57.330 -7.0301
## 5 parent 59.4 57.330 2.0699
## 7 parent 47.0 47.352 -0.3515
## 7 parent 45.1 47.352 -2.2515
## 14 parent 27.7 24.247 3.4528
## 14 parent 27.3 24.247 3.0528
## 21 parent 10.0 12.416 -2.4163
## 21 parent 10.4 12.416 -2.0163
## 30 parent 2.9 5.251 -2.3513
## 30 parent 4.0 5.251 -1.2513
</code></pre>
<p>A plot of the fit is obtained with the plot function for mkinfit objects.</p>
<pre><code class="r">plot(m.L1.SFO, show_errmin = TRUE, main = "FOCUS L1 - SFO")
</code></pre>
<p><img src="data:image/png;base64,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" alt="plot of chunk unnamed-chunk-4"/></p>
<p>The residual plot can be easily obtained by</p>
<pre><code class="r">mkinresplot(m.L1.SFO, ylab = "Observed", xlab = "Time")
</code></pre>
<p><img src="data:image/png;base64,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" alt="plot of chunk unnamed-chunk-5"/></p>
<p>For comparison, the FOMC model is fitted as well, and the \(\chi^2\) error level
is checked.</p>
<pre><code class="r">m.L1.FOMC <- mkinfit("FOMC", FOCUS_2006_L1_mkin, quiet=TRUE)
plot(m.L1.FOMC, show_errmin = TRUE, main = "FOCUS L1 - FOMC")
</code></pre>
<p><img src="data:image/png;base64,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" alt="plot of chunk unnamed-chunk-6"/></p>
<pre><code class="r">summary(m.L1.FOMC, data = FALSE)
</code></pre>
<pre><code>## mkin version: 0.9.46.3
## R version: 3.4.3
## Date of fit: Thu Mar 1 14:24:56 2018
## Date of summary: Thu Mar 1 14:24:57 2018
##
## Equations:
## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
##
## Model predictions using solution type analytical
##
## Fitted with method Port using 611 model solutions performed in 1.376 s
##
## Weighting: none
##
## Starting values for parameters to be optimised:
## value type
## parent_0 89.85 state
## alpha 1.00 deparm
## beta 10.00 deparm
##
## Starting values for the transformed parameters actually optimised:
## value lower upper
## parent_0 89.850000 -Inf Inf
## log_alpha 0.000000 -Inf Inf
## log_beta 2.302585 -Inf Inf
##
## Fixed parameter values:
## None
##
## Optimised, transformed parameters with symmetric confidence intervals:
## Estimate Std. Error Lower Upper
## parent_0 92.47 1.482 89.31 95.63
## log_alpha 11.25 598.200 -1264.00 1286.00
## log_beta 13.60 598.200 -1261.00 1289.00
##
## Parameter correlation:
## parent_0 log_alpha log_beta
## parent_0 1.0000 -0.3016 -0.3016
## log_alpha -0.3016 1.0000 1.0000
## log_beta -0.3016 1.0000 1.0000
##
## Residual standard error: 3.045 on 15 degrees of freedom
##
## Backtransformed parameters:
## Confidence intervals for internally transformed parameters are asymmetric.
## t-test (unrealistically) based on the assumption of normal distribution
## for estimators of untransformed parameters.
## Estimate t value Pr(>t) Lower Upper
## parent_0 92.47 64.45000 4.757e-20 89.31 95.63
## alpha 76830.00 0.02852 4.888e-01 0.00 Inf
## beta 803500.00 0.02852 4.888e-01 0.00 Inf
##
## Chi2 error levels in percent:
## err.min n.optim df
## All data 3.619 3 6
## parent 3.619 3 6
##
## Estimated disappearance times:
## DT50 DT90 DT50back
## parent 7.249 24.08 7.249
</code></pre>
<p>We get a warning that the default optimisation algorithm <code>Port</code> did not converge, which
is an indication that the model is overparameterised, <em>i.e.</em> contains too many
parameters that are ill-defined as a consequence.</p>
<p>And in fact, due to the higher number of parameters, and the lower number of
degrees of freedom of the fit, the \(\chi^2\) error level is actually higher for
the FOMC model (3.6%) than for the SFO model (3.4%). Additionally, the
parameters <code>log_alpha</code> and <code>log_beta</code> internally fitted in the model have
excessive confidence intervals, that span more than 25 orders of magnitude (!)
when backtransformed to the scale of <code>alpha</code> and <code>beta</code>. Also, the t-test
for significant difference from zero does not indicate such a significant difference,
with p-values greater than 0.1, and finally, the parameter correlation of <code>log_alpha</code>
and <code>log_beta</code> is 1.000, clearly indicating that the model is overparameterised.</p>
<p>The \(\chi^2\) error levels reported in Appendix 3 and Appendix 7 to the FOCUS
kinetics report are rounded to integer percentages and partly deviate by one
percentage point from the results calculated by mkin. The reason for
this is not known. However, mkin gives the same \(\chi^2\) error levels
as the kinfit package and the calculation routines of the kinfit package have
been extensively compared to the results obtained by the KinGUI
software, as documented in the kinfit package vignette. KinGUI was the first
widely used standard package in this field. Also, the calculation of
\(\chi^2\) error levels was compared with KinGUII, CAKE and DegKin manager in
a project sponsored by the German Umweltbundesamt [@ranke2014].</p>
<h1>Laboratory Data L2</h1>
<p>The following code defines example dataset L2 from the FOCUS kinetics
report, p. 287:</p>
<pre><code class="r">FOCUS_2006_L2 = data.frame(
t = rep(c(0, 1, 3, 7, 14, 28), each = 2),
parent = c(96.1, 91.8, 41.4, 38.7,
19.3, 22.3, 4.6, 4.6,
2.6, 1.2, 0.3, 0.6))
FOCUS_2006_L2_mkin <- mkin_wide_to_long(FOCUS_2006_L2)
</code></pre>
<h2>SFO fit for L2</h2>
<p>Again, the SFO model is fitted and the result is plotted. The residual plot
can be obtained simply by adding the argument <code>show_residuals</code> to the plot
command.</p>
<pre><code class="r">m.L2.SFO <- mkinfit("SFO", FOCUS_2006_L2_mkin, quiet=TRUE)
plot(m.L2.SFO, show_residuals = TRUE, show_errmin = TRUE,
main = "FOCUS L2 - SFO")
</code></pre>
<p><img src="data:image/png;base64,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" alt="plot of chunk unnamed-chunk-8"/></p>
<p>The \(\chi^2\) error level of 14% suggests that the model does not fit very well.
This is also obvious from the plots of the fit, in which we have included
the residual plot.</p>
<p>In the FOCUS kinetics report, it is stated that there is no apparent systematic
error observed from the residual plot up to the measured DT90 (approximately at
day 5), and there is an underestimation beyond that point.</p>
<p>We may add that it is difficult to judge the random nature of the residuals just
from the three samplings at days 0, 1 and 3. Also, it is not clear <em>a
priori</em> why a consistent underestimation after the approximate DT90 should be
irrelevant. However, this can be rationalised by the fact that the FOCUS fate
models generally only implement SFO kinetics.</p>
<h2>FOMC fit for L2</h2>
<p>For comparison, the FOMC model is fitted as well, and the \(\chi^2\) error level
is checked.</p>
<pre><code class="r">m.L2.FOMC <- mkinfit("FOMC", FOCUS_2006_L2_mkin, quiet = TRUE)
plot(m.L2.FOMC, show_residuals = TRUE,
main = "FOCUS L2 - FOMC")
</code></pre>
<p><img src="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAfgAAAGwCAMAAABy/YdMAAADAFBMVEUAAAABAQECAgIDAwMEBAQFBQUGBgYHBwcICAgJCQkKCgoLCwsMDAwNDQ0ODg4PDw8QEBARERESEhITExMUFBQVFRUWFhYXFxcYGBgZGRkaGhobGxscHBwdHR0eHh4fHx8gICAhISEiIiIjIyMkJCQlJSUmJiYnJycoKCgpKSkqKiorKyssLCwtLS0uLi4vLy8wMDAxMTEyMjIzMzM0NDQ1NTU2NjY3Nzc4ODg5OTk6Ojo7Ozs8PDw9PT0+Pj4/Pz9AQEBBQUFCQkJDQ0NERERFRUVGRkZHR0dISEhJSUlKSkpLS0tMTExNTU1OTk5PT09QUFBRUVFSUlJTU1NUVFRVVVVWVlZXV1dYWFhZWVlaWlpbW1tcXFxdXV1eXl5fX19gYGBhYWFiYmJjY2NkZGRlZWVmZmZnZ2doaGhpaWlqampra2tsbGxtbW1ubm5vb29wcHBxcXFycnJzc3N0dHR1dXV2dnZ3d3d4eHh5eXl6enp7e3t8fHx9fX1+fn5/f3+AgICBgYGCgoKDg4OEhISFhYWGhoaHh4eIiIiJiYmKioqLi4uMjIyNjY2Ojo6Pj4+QkJCRkZGSkpKTk5OUlJSVlZWWlpaXl5eYmJiZmZmampqbm5ucnJydnZ2enp6fn5+goKChoaGioqKjo6OkpKSlpaWmpqanp6eoqKipqamqqqqrq6usrKytra2urq6vr6+wsLCxsbGysrKzs7O0tLS1tbW2tra3t7e4uLi5ubm6urq7u7u8vLy9vb2+vr6/v7/AwMDBwcHCwsLDw8PExMTFxcXGxsbHx8fIyMjJycnKysrLy8vMzMzNzc3Ozs7Pz8/Q0NDR0dHS0tLT09PU1NTV1dXW1tbX19fY2NjZ2dna2trb29vc3Nzd3d3e3t7f39/g4ODh4eHi4uLj4+Pk5OTl5eXm5ubn5+fo6Ojp6enq6urr6+vs7Ozt7e3u7u7v7+/w8PDx8fHy8vLz8/P09PT19fX29vb39/f4+Pj5+fn6+vr7+/v8/Pz9/f3+/v7////isF19AAAACXBIWXMAAAsSAAALEgHS3X78AAAbtUlEQVR4nO2dCUBU1f7HT/l/72+4IIhL+qyez6Uy9ZX5FAVkGe2p4JYriogLuWS5AgqWlRZpmeWKVmqaCkk99eXrSZFbmopb4fZXwhUVEhQQQmDO/84CDDN3Zs6959yZO3N+n/c6DHfu/c7P+XDnLnPPuQgDXIKcXQDgHEA8p4B4TgHxnALiOQXEcwqI5xQQzykgnlNAPKeAeE4B8ZwC4jkFxHMKiOcUEM8pIJ5TQDyngHhOAfGcAuI5BcRzCojnFLcSjwz8KDzcqWnSTLNHN7HyE7+GT489q3u2FBvayrXPN2ga8E31UqXSMkuF309hfATpl6zOdy3cTPzzXQQyMJ6HUMMGCL2FsXYIQk3/hOplmIh/G6Fnn0NoSdVSRvEFYxs3n3zffqZO/GqMl+vF1+S7Fm4m3qjw2CP1Uiortj1W5xf8NWp6RFs8CAWaiG+BDmOcjJqbLTURtWiJJtrPFMTXjcB4VF3dczX5roV7ih+M3tX9SEBjcLBu5cSXQ/ppq8VX/g86hHH5hg3a2ks1RqczkZfWbqYg3q8txq39dM/V5Cv9r2OLe4pvjS7rfpxBHXFLdKXWs7o2BD0avHhfudlSFaNHVxQjb2viazIF8XNRXp7QCM/V5LsWbiZeRySurINKdL/fRR6Vj1TvutWIvz2mvjBfyyOm0w18gobazxTEf4N2/xul6j49HrG5a6he3Ex82/bt28dVr52/omeF7fn16mdLq9uyjHdbCx8HJtP1rHmk3R39gzghJ91apiD+NopfgG4a9heq8l0LNxNfe3v8BhqNg9Am4dGlxq3KPdBdjIvRnyq0ie89xDgH1amsvZT2XdT+muFhpLCW77aWKYjHfw1+6Qn9czX5jvk3ssI9xR99pF5qZcXWuo+exjtQq7P4wVDUB3dBS7Taj3XreWu0DePvURuzpT5HHX4nydSJH13fa7j+uZp818I9xVcdcy8UVuOBCD1VH3mcx7sRatIUoVSMP0aoczuE1lQtpT9SL8RPo78IP/+wm6kTvxKhj/TP1eS7Fm4qHv8r2KdpiOHM3Yfd6z0Vrts+7w9u7B2o23JrN3Rp6NV9u7ZqKT0FlY/qf5bazdSJP4nQEcNzNfkuhVuJB8gB8ZwC4jkFxHMKiOcUEM8pIJ5TQDyngHhOAfGcAuI5BcRzCojnFBDPKSCeU0A8p4B4TgHxnALiOQXEcwqI5xQQzykgnlMoxOelACpmx0OlxCeHJwHqpaftPh404lfJXxZQnAmOEv8gy/ZnC+BYHCX+zYDxPbbJDwNY4yDxqbMxftjvkvw0gDEOEv/KBaH5cp38NIAxDhI/86TQrNsiPw1gjIPEHxlYhK/75cpP443fWB66ZYm8gKN27nYFB4Wekh/GHeunsztX81qSyAs4Snz++0+vg+M5ctZvZpf1pRPF5/nu6Lqqb4X8NN5wF/Fv78Yh5W/ukZ/GG+4iPvIKHnM99RP5abzhLuKXbMVxR2aly0/jDXcRX9xr2dRBEfLDuMNdxOOyrWNekZ/FH24jHuPjc+Rn8Ycbib81Qn4Wf7iReG2w/Cz+cCPx2NVuy+JUaonfGT4qVVZKiL51tvggOHFHjqn4FdHXc6a/LyfFoM/Z4kflyA/jDlPxfpXChtJP7G5GaFmzf1zCOLVDw1arhd+2NC+c3KpleIHwMPnvf1uBB6LOurmcLX7uMflh3CGIv/+SRk+It671CTL81tv0u220oHxOGMadllZkPCb8Ni0zentJwcJQ4eH72h/qqmWNX/61/DDuMF3jQ+5gnB8gNhfKwhe8hI+DzOTJgimUi5vohtT3ER4W6t0pKj4/rl0Dj3ZzzG/BaCl+B5yqJ8dU/LGeK1b5HxSbSxB/2RPjqJG7bho0e2dhXHzV4E1p8aHT9uXmHpg70Hy6hfijMfbDACO19urzv0qxvBuODpRQHtMf44aZ2s9RuU5WRFRxXp9JNeL1l0AoJL5Rma7V/sV8uoX4m+H2wwAjZMfxaJ5PN0HgMp/nlvQeq5OVH9nMa3Rhtfi+rXRzKSS+v7DG5x2cG2o+3UJ8ZYj9MMAIoXiiLKW28THt6nm0mXXPfLplFyo4g0OOC4i3hoh4F7uxrjMhE0/WN8lR4ncYDjif6mf+xPA7MtI4xQXO1e/7S4fjwfX9L5pPn2HxbdysE/bTAAMuIL7TV+tRTM7b/ubTLcUv+5f9NMCAC4iv9zAf5eCiBubTLcWnrLSfBhhwAfG6NT721jt+5tMtxR+eZz8NMOAC4n9s2eF4UD0/gm38NbjakhgXEG8NS/EVGvlpvPF5UDQzgj8VeQFHioczOOSUZTGkTOQFHCq+F5zBUQ0OFf9ynvw4gC0OFT8DesirBoeKX7pbfhzAFoeK37ZGfhzAFoeKP5ggPw5gi0PFZ4+VHwewxaHiK3rJjwPY4lDx+q4BgCpwrPixYiOuAc7AseKX7JSfBzDFseL3LJafBzDFseKvwaX1asGx4rFoDzDACThYfCAMa6oSHCz+lbPyAwGWkIhHVUhKFhX/SbKkDEAxCNf4D8fdvj1uo+gs1rpJi4pPXyC1QEAZCMU/WYxxcRvRWax1kxYVnzdYaoGAMhCK9ynE+H5j0VmsdZMWFY8trsIGnAOh+DGjb90KHy06i7Vu0uLiez+QWCCgDITi70Z4+0TcFZ3FWjdpcfGvZ0gsEFAGBQ7nfk7U42fRW1bHOvE9RMDREIovCG18dVIhWeS1ND1DBok9eWSulOoAxSAUH74QFfcZIzrL9QkZJ7t4BFvcRVL8o75I9HMAcDiE4lvcQzhXfK+++9zCjvE5Cy3OwouLxxbdqQGnQCi+ZSnCxc1FZ2lcgr1ycKGn+XQr4kMLpBUIKAOh+OhklBU1TnSW6DFn5sfkxFt8hFsRH3dIWoGAMhCKL4xu4h2RLzpL2eKOnn9uNcViBD4r4jevlVYgoAyE4ufZnk0MK+IzoyUnAQpAKH56s5Dtf0hLtiJeC3t3qoD0BE75nvAnZkpKtiIeD70hKQZQBuIzd3dWd20hKdma+BVfSooBlIFQ/HqN17jvpd1axJp42MirAkLxodtLpCZbEw8beVVAKL659GvlrInHw2AjrwIIxW+ZlmtzPhGsil+5RWoUwB5C8awuttSROUlSDqAIDr68WocWLr9SAU4Qj4dfk58KMEKBCzGMWBe/Cjbyzof+QgxrWBd/dqKkIEAJ6C/EsIZ18bCRVwH0F2JYw7p4POKqpCRAAegvxLCGDfFrN0lKAhSA/kIMa9gQn2PR3wpwNM44nMO4j/gdMwHHQSh+uaZyUKP1orNI6i1rJEk8CnAchOK9L347/lQz0Vkk9ZY1stYn5N1S4hoBBSAU3/TMkJ+zWfSW1bNmWr+r66JISwSUgFD8as9I/JT4/d+l9ZbVE1SxeTnuV0ReJcAc5W4qbEN8IC4OxuOy7WcDiuGUvfqRn0a1escXblDjTAjFX/xnw8aDsq3Pd9DksfGmwk8EW507yWd8mOco4hoBBSAU/2LMxUtzfO3PZ4KNNT64+Pj3PUIkX8UHMIR0DJxyjB82FZ3Fw8pYaDa38RiPGwwjWTsTQvELE7KyEhJFZ/m1y1dS1/iBv2G8rymMXe9MGAxweG/Q7IfSxF/wXb4+pHMOeZUAc1js1Ve+FyhNPC7c8eWNXfNJsgGFIBJfFNO53guxNnbG0uMtp9kSr0Pbw+LQH3AcJOIL20adLjozvrO0S+vticcbPpCUBzCFRPwsw4XwE9j0lq3moa/YXY4Bx0AivsM5/eNM8bFsrWFXPF4KY945DxLxHoZvUEsfk5RsX3yhLxzROQ0Ja/zZjpKS7YvHC7ZJSgQYQrSNN/RonzBHUjKB+Ac94atZZ0G2Vz/xl+Jfxrdj1ZOmhuRYSZEAO4iO4wtndfDoMFuadyLxOOy8tFCAFc65yraaczC0rZNwsng8O1X+KwAUOFt8oa/ELQjABmeLx9/ClThOwenicQwMbusMnC++POSk/BcB5OJ88fh6d4vuV4DiqEA8/vcouNLa4ahBPF4UJ/9lAHmoQjyevaT64e/zBsy+Kf9VAUIYdKGS0U3aHO2Eqn7ThX7/ub/PV/IwmoBU6MXL6SZtQfngrw0PNukO7lLhoizFoRcvo5u0CCX9vtD/XLxXaE7NkLIoIAd68TK6SYtRPvFN3Y/v5pRfe/g+jICoOE7pJi2K9s1XdXdCCGza8/EX4JIsxVFgr35/rJ4XX5K64MeD7+HTQ45uPBT1o4yXBSShgPjcDD2jhkheMr374Q92Cz9/hgtzFIde/PluTWZU4iIpvWWtcqf/wBThx48LpS8KSINevF9CzrQFjMTjipk+p/C9vr/IWBSQBL34hiW4outlRuIx3uD91+DvZC0JSIFe/DNHhI1z4D1W4nH5B4EZ8pYEJEAvPrX+RIzjnmYmHuPskaN/k7ssQAiDvfrsdOEg/NA75pPli8f42Euv35G/NECAOr6ds2RP8FRY65VEreIx3h8WfpQuAbCBesVjfCY6YH0xbQggjprFY3x/lf/EfXDiXgnULV7g9GzfuONwTR5zVC8e48ofpnaf/sNDRmmAARcQL6A9EhcwJOkKu0DANcTryNkwqsf4zXB3Uka4jngd51aP9B3x8dE/2Cdzh2uJ13F9+8zgXpPXHYPBr6lwPfE6Kn79YvZLfsPf2nGhXLkXcW9cU7yBm3s/mhjsNzjus/3QA0MyrizewO8/bUwYGRAQ9vryb07CfQyJcX3xBv7bvlG7+BmDA4J6Ry5YvSvjJmwC7OAm4vc13Hp/sedd4VHZbwe3fTQrPDDQ76WIWR9s+vb41QcOrMN1cBPxPT8WmrDanW5Lr/286/P3ZkX07eXv33vE1IQPN/xr/y/XYEhFA24ivu1+oZk93OrzZbcyD+zcsCzh1TH9ewmEDBn3Wnxi0tZd6RmXcoiGZbg66+VFbjVMk5uIH6V7sbbEo2FX5medOvDt9qSlb86OHh4aFOgfEOKvGTomek584idJ21PTDmScz8rNN/la8Jrvgbwdge504shNxJe26DTyiZ5UEWX5Vy5k7N+bsiVpWeK8udFRwwZo/EJ6anT/07z8bEjPLgOCxiauSdqUkpKWdjAj41LW1fx8Fz6J5CbiMf7s9f8oll2a//Jz72967Zlpu1O2Jwl/F+/Gxr4WHT1i2BCNxj9A0zNQ07OXxt9fowkdNmxEdHT0zNjY+YmJiSuSkpK2pqSkfJeWlnY8IyPjQlZW1vV8AWcccdyJGfhBrft3u414ZQmdKjTPL7c9U7kgVZCbmZFxXHC9U3D+ueB+qfA3EBcbGztF+JOIHCbQW6PRBL4oND2765quQhPcJUh3c87+uqeHRUbreFXfATEuUc/yJD26PyOBnWkGDhn6qmWczjKSX0WFeWm3Wjw/tu1zpn9x6hgRQ/VEBMVtHh8qfjttZtzXSzM4PKFXuk8v+L8G318Y7K8y/C0kvmHomxo7M9rApGFGBmuq6Nalm/FRY+8ub1U8bTqioAIjYjw0/NVNsb6P7Xq8l/LDZydi05xdhmza/Sg0M0aaTFFgRIydhj+8ju4k/r7fup/eGeq6V4D1ektogt4wmaLciBjJqyQWp2oerI/f4cJXfR7yWfBNZHPTrzKUGxHDvcS7Onv+3qZXpukE5fbqQbyqAfGcoqD4uIxafLqZnvWfMQhZxSBj41oGISwK+SI5Qx4DFRN/MbY2jbrT07oNg5CGDDKebcUgxPtF+oznn4yVR5ztrykpxJsTyCBj7VYGISwK+f5tBiGDCugzro6lzxADxIsD4skB8eaAeGJAvDkgnhwQTwCIFwfEk8PirUo7zCCERSHnvmIQsqTU/jz2KFDoq2KG4gFXAsRzCojnFBDPKSCeU0A8p4B4TgHxnALiOQXEcwoz8flhXmH5lBm+CKFX6CJKWtIXY8igKyb1WU//85SFGDMYvCsiMBMfO/WPqZQ3C9d63ygqoju9vbwroi7GkEFXTHb9wyUJ3egKMWYweFfEYCa+3T68rx1dxK36L9QfcJsqIn03oi7GkEFXTPpEjHOa0BVizGDwrojBTHy9XJzbgC7iVNCp3yNo+2UhBsUgFsVUTHuduhBdBpN3xRJm4j3ycK4HfUxOI8oAxKCYqjeFppj0rgmVtIUYMigLsQIz8W0O4gNt6SJO/ITx3ccp60AMikHUxWjnBV6mLcSYweRdsYSZ+Jkx2pg5dBEHmp4rmzGVsg7EoBhEXcyh9veKioroCjFmMHlXLGEmvqBfyzCLfpXS0K5o3SSKduQpxKAYRF3MIqSDrhBjBpN3xRI4gcMpIJ5TQDyngHhOAfGcAuI5BcRzCojnFBDPKSCeU0A8p4B4TgHxnALiOQXEcwqI5xQQzykgnlNAPKdQiC/PAlTMdcXE7/CLBtRL+2ylxMONClQN/Y0Krk/IONnFI/iS+XQQr2roxXefW9gxPmdhgPl0EK9q6MU3LsFeObjQs3pCchc9j4fR1gYoCL346DFn5sfkxPczn+5Wtxh1P+jFly3u6PnnVlN+N58O4lUN3E2aU1Qn/kRoYN8D8l8VIERt4q8H3MB5mvPyXxYgQ23i12wXmh9Y3EsAsInaxC/5VmiOzZX/sgAZahOfMVKL8ZS98l8WIENt4vEq/1eD3pX/qgAhqhOPizPZD+wBWKA+8YBDAPGcAuI5RQHxp5P0hPSXVxHgEBQQfylFT/8B8ioCHAJ81HMKofjlmspBjdZLSgbxqoZQvPfFb8efaiYpGcSrGkLxTc8M+Tm7saRkEK9qCMWv9ozET0m7YzWIVzWwc8cpIJ5TSMSjKiQlm4v/Q1phgLI4ao1f59sn8Af5YQBrJIgvHyspuZb4vZHl+H6wnR6aBop+vS/pdQBZEIpf9ZjwSd9HUnIt8a9mCs3GDQSLrQyYHrxI0gsBciAU3/LE5JzPlorOcr5bkxmVuMhio1BL/DRS8cdH6S69+q/9GQE6CMU3rNi+S9tRdBa/hJxpC+yJ3xtVgQtJPurhYksHQSj+maWZo34VP3PXsARXdL1sIn6HRs8TwaZzrfXt5/89QT36y6u/h8urFYdQfGonbVTDZaKzPHME4/TAe7bXeIESonpuBNzAuZoLRPMCFNAfzqXWn4hx3NN2xROSEQZdqBwBg+P47HSMtYfeMZ8MZ+5UDaF4BmfuAFVBvsYXJm6WlAziVY2Ej3ptJ0nJIF7VSBCf3lpSMohXNRK28f+7XFIyiFc18H08p4B4TnHchRiAqiBc4z8cd/v2uI2Skm2JPzHzld2SwgDWEIp/shjj4jaSkm2I39Mv48L0tySlAYwhFO9TiPF9wuvqjybq8XsmMfE8vpIo0rY5IbR/XWTlWVW2i4ZN352tikoYtf/IJBI/ZvStW+GjycRfS9MzxC8tLRffSxNpO+vavpusPKvGdmfH6V8vGLpXBZWwavteJBJ/N8LbJ+IumXgjNj7q+9/E+KFvhaQ455Kou0xgrgtfLXp5Sv/4fNMJTjmcO91j447+X8qPdjyRV4QmVVpXIjWR3ePYg929Sk2mEB3OxbL+di7v05W2P2nUxqKdQpPwnbPLkE38f1bHblvyjckUOIFDxF3fbWc+Cqt0dhmyCe/y+c+J/1hhMgXEk3F/2Wubyp1dhHwGRAtNJxniYWAE1yai94x14YNN91FgYAQueG/HT1vOxaaZTIGBEbjgXs/1hxcN1ZpMgYERCDm45ayzS6Dhwbr5X9XaN6XfuSPqQuXqPBwwc93oGGdXwRJ68URdqPB3vXsNsX12WNWsXCM0E446uwyGEIovCG18dZL4qNIWXaiM1BJ/vH8B/q2nxZ2qXIaobKH5aqWzy2AIofjwhai4zxjRWYi6UM3KEJq1W2UWSUDpnIHiPbzYEJ8uNLXOfLk6hOJbCGJzxffqLbpQVXWaDDGZadL/Cc3WJLpabZDn1TfhhXaKxeMrPY4W76p1rtvVIe0fX4pwcXPxeUi6UCXPx7gyTLm+kGGThebvCn6JkvVq/zcKlIt3PITio5NRVtQ4Scm1d+5i+kz321Tza1mxpCy7/O0noZkzjG2oW0MovjC6iXdEvt3ZTDE7nCv4taaf9IPIkP59fyMtkYSghVUNQAabL2kIxJsyPVU4/A+x+rQMztZPSI/0cadtsNKQiD/ZqeGgzBfrPfq41dnai0yzIT5Q14y8RVIfKReD2w2H0bIkQCLed3HRO48ul7o62RM/LFdiIMASEvF1b+FrSPLAlDbEx63H+GhfqYEAS0jE18FyrsiwIb5shn/QiBzJiQBDnCJeQGvrSUB5nCUecDLQaZJT4GJLTgHxnKKA+IOxel78p7yKAIeggPibhk6TLw+RVxHgEOCjnlNAPKeAeE4B8ZwC4jkFxHMKiOcUEM8pIJ5T6MVfn5BxsotH8CXz6SBe1dCL7z63sGN8zsIA8+kgXtXQi29cgr1ycKGn+XQQr2roxUePOTM/Jie+n/l0EK9q6MWXLe7o+edWU2q6QBs7TbZ5mbY2QEGU26tPXiV/WUBxQDynKNd3DsSrGuXEf9dZU4t63vQ0aMggpC6DDE8W/5rHGGR4NdXIo/1NFuLFOk2aE0gWZRMmg6mwKITJjc4HMRhp4epY+gwxKLbx5oB4c0A8MSDeHBBPDognAMSLA+LJAfHmcCJewyBjfTKDEBaF/LiYQcgQBmO3XJc2FBkxDMWLD4gqjT8eMghhUUjlAwYhLAphE2IJQ/GAKwHiOQXEcwqI5xQQzykgnlNAPKeAeE4B8ZzCTHx+mFeY9fHuyfBFCL1CF1HSkr4YQwZdManPevqfpyzEmMHgXRGBmfjYqX9MjaOL0HrfKCqiG5J+eVdEXYwhg66Y7PqHSxK60RVizGDwrojBTHy7fXgf5c2CbtV/of6A21QR6bsRdTGGDLpi0idinNOErhBjBoN3RQxm4uvl4twGdBGngk79HjGcsg7EoBjEopiKaa9TF6LLYPKuWMJMvEcezvWgj8lpRBmAGBRT9abQFJPeNaGSthBDBmUhVmAmvs1BfKAtXcSJnzC+a/32KGQgBsUg6mK08wIv0xZizGDyrljCTPzMGG3MHLqIA03Plc2YSlkHYlAMoi7mUPt7RUVFdIUYM5i8K5YwE1/Qr2XYPboI7YrWTaJorztADIpB1MUsMo4CT1OIMYPJu2IJnMDhFBDPKSCeU0A8p4B4TgHxnALiOQXEcwqI5xQQzykgnlNAPKeAeE4B8ZwC4jkFxHMKiOcUEM8pIJ5TQDyn8C2+U506qE6dF3h8Fzj8J9fG0NfO2VU4HhDv7AKcBK//7mqQsUFvNZ8f37pRIi6c3KplOIOxSFUOiDc2aOsvaGFZWl0cvb2kYGGos8tSHBBvbFCZFpVgLcJNdP1XfJxdluKAeGNj+L/wn3cWxsVXnVyV8oB4Y1MtPiKqOK/PJCdXpTwg3thUi8+PbOY1WqEho1UE9+J5BcRzCojnFBDPKSCeU0A8p4B4TgHxnALiOQXEcwqI5xQQzykgnlNAPKeAeE4B8ZwC4jkFxHMKiOeU/wfy4LC7udPeXAAAAABJRU5ErkJggg==" alt="plot of chunk unnamed-chunk-9"/></p>
<pre><code class="r">summary(m.L2.FOMC, data = FALSE)
</code></pre>
<pre><code>## mkin version: 0.9.46.3
## R version: 3.4.3
## Date of fit: Thu Mar 1 14:24:57 2018
## Date of summary: Thu Mar 1 14:24:57 2018
##
## Equations:
## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
##
## Model predictions using solution type analytical
##
## Fitted with method Port using 81 model solutions performed in 0.169 s
##
## Weighting: none
##
## Starting values for parameters to be optimised:
## value type
## parent_0 93.95 state
## alpha 1.00 deparm
## beta 10.00 deparm
##
## Starting values for the transformed parameters actually optimised:
## value lower upper
## parent_0 93.950000 -Inf Inf
## log_alpha 0.000000 -Inf Inf
## log_beta 2.302585 -Inf Inf
##
## Fixed parameter values:
## None
##
## Optimised, transformed parameters with symmetric confidence intervals:
## Estimate Std. Error Lower Upper
## parent_0 93.7700 1.8560 89.5700 97.9700
## log_alpha 0.3180 0.1867 -0.1044 0.7405
## log_beta 0.2102 0.2943 -0.4555 0.8759
##
## Parameter correlation:
## parent_0 log_alpha log_beta
## parent_0 1.00000 -0.09553 -0.1863
## log_alpha -0.09553 1.00000 0.9757
## log_beta -0.18628 0.97567 1.0000
##
## Residual standard error: 2.628 on 9 degrees of freedom
##
## Backtransformed parameters:
## Confidence intervals for internally transformed parameters are asymmetric.
## t-test (unrealistically) based on the assumption of normal distribution
## for estimators of untransformed parameters.
## Estimate t value Pr(>t) Lower Upper
## parent_0 93.770 50.510 1.173e-12 89.5700 97.970
## alpha 1.374 5.355 2.296e-04 0.9009 2.097
## beta 1.234 3.398 3.949e-03 0.6341 2.401
##
## Chi2 error levels in percent:
## err.min n.optim df
## All data 6.205 3 3
## parent 6.205 3 3
##
## Estimated disappearance times:
## DT50 DT90 DT50back
## parent 0.8092 5.356 1.612
</code></pre>
<p>The error level at which the \(\chi^2\) test passes is much lower in this case.
Therefore, the FOMC model provides a better description of the data, as less
experimental error has to be assumed in order to explain the data.</p>
<h2>DFOP fit for L2</h2>
<p>Fitting the four parameter DFOP model further reduces the \(\chi^2\) error level.</p>
<pre><code class="r">m.L2.DFOP <- mkinfit("DFOP", FOCUS_2006_L2_mkin, quiet = TRUE)
plot(m.L2.DFOP, show_residuals = TRUE, show_errmin = TRUE,
main = "FOCUS L2 - DFOP")
</code></pre>
<p><img src="data:image/png;base64,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" alt="plot of chunk unnamed-chunk-10"/></p>
<pre><code class="r">summary(m.L2.DFOP, data = FALSE)
</code></pre>
<pre><code>## mkin version: 0.9.46.3
## R version: 3.4.3
## Date of fit: Thu Mar 1 14:24:58 2018
## Date of summary: Thu Mar 1 14:24:58 2018
##
## Equations:
## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) *
## exp(-k2 * time)) / (g * exp(-k1 * time) + (1 - g) *
## exp(-k2 * time))) * parent
##
## Model predictions using solution type analytical
##
## Fitted with method Port using 336 model solutions performed in 0.721 s
##
## Weighting: none
##
## Starting values for parameters to be optimised:
## value type
## parent_0 93.95 state
## k1 0.10 deparm
## k2 0.01 deparm
## g 0.50 deparm
##
## Starting values for the transformed parameters actually optimised:
## value lower upper
## parent_0 93.950000 -Inf Inf
## log_k1 -2.302585 -Inf Inf
## log_k2 -4.605170 -Inf Inf
## g_ilr 0.000000 -Inf Inf
##
## Fixed parameter values:
## None
##
## Optimised, transformed parameters with symmetric confidence intervals:
## Estimate Std. Error Lower Upper
## parent_0 93.9500 NA NA NA
## log_k1 3.1370 NA NA NA
## log_k2 -1.0880 NA NA NA
## g_ilr -0.2821 NA NA NA
##
## Parameter correlation:
</code></pre>
<pre><code>## Warning in print.summary.mkinfit(x): Could not estimate covariance matrix; singular system:
</code></pre>
<pre><code>## Could not estimate covariance matrix; singular system:
##
## Residual standard error: 1.732 on 8 degrees of freedom
##
## Backtransformed parameters:
## Confidence intervals for internally transformed parameters are asymmetric.
## t-test (unrealistically) based on the assumption of normal distribution
## for estimators of untransformed parameters.
## Estimate t value Pr(>t) Lower Upper
## parent_0 93.9500 NA NA NA NA
## k1 23.0400 NA NA NA NA
## k2 0.3369 NA NA NA NA
## g 0.4016 NA NA NA NA
##
## Chi2 error levels in percent:
## err.min n.optim df
## All data 2.53 4 2
## parent 2.53 4 2
##
## Estimated disappearance times:
## DT50 DT90 DT50_k1 DT50_k2
## parent 0.5335 5.311 0.03009 2.058
</code></pre>
<p>Here, the DFOP model is clearly the best-fit model for dataset L2 based on the
chi<sup>2</sup> error level criterion. However, the failure to calculate the covariance
matrix indicates that the parameter estimates correlate excessively. Therefore,
the FOMC model may be preferred for this dataset.</p>
<h1>Laboratory Data L3</h1>
<p>The following code defines example dataset L3 from the FOCUS kinetics report,
p. 290.</p>
<pre><code class="r">FOCUS_2006_L3 = data.frame(
t = c(0, 3, 7, 14, 30, 60, 91, 120),
parent = c(97.8, 60, 51, 43, 35, 22, 15, 12))
FOCUS_2006_L3_mkin <- mkin_wide_to_long(FOCUS_2006_L3)
</code></pre>
<h2>Fit multiple models</h2>
<p>As of mkin version 0.9-39 (June 2015), we can fit several models to
one or more datasets in one call to the function <code>mmkin</code>. The datasets
have to be passed in a list, in this case a named list holding only
the L3 dataset prepared above.</p>
<pre><code class="r"># Only use one core here, not to offend the CRAN checks
mm.L3 <- mmkin(c("SFO", "FOMC", "DFOP"), cores = 1,
list("FOCUS L3" = FOCUS_2006_L3_mkin), quiet = TRUE)
plot(mm.L3)
</code></pre>
<p><img 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" alt="plot of chunk unnamed-chunk-12"/></p>
<p>The \(\chi^2\) error level of 21% as well as the plot suggest that the SFO model
does not fit very well. The FOMC model performs better, with an
error level at which the \(\chi^2\) test passes of 7%. Fitting the four
parameter DFOP model further reduces the \(\chi^2\) error level
considerably.</p>
<h2>Accessing mmkin objects</h2>
<p>The objects returned by mmkin are arranged like a matrix, with
models as a row index and datasets as a column index.</p>
<p>We can extract the summary and plot for <em>e.g.</em> the DFOP fit,
using square brackets for indexing which will result in the use of
the summary and plot functions working on mkinfit objects.</p>
<pre><code class="r">summary(mm.L3[["DFOP", 1]])
</code></pre>
<pre><code>## mkin version: 0.9.46.3
## R version: 3.4.3
## Date of fit: Thu Mar 1 14:24:59 2018
## Date of summary: Thu Mar 1 14:24:59 2018
##
## Equations:
## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) *
## exp(-k2 * time)) / (g * exp(-k1 * time) + (1 - g) *
## exp(-k2 * time))) * parent
##
## Model predictions using solution type analytical
##
## Fitted with method Port using 137 model solutions performed in 0.283 s
##
## Weighting: none
##
## Starting values for parameters to be optimised:
## value type
## parent_0 97.80 state
## k1 0.10 deparm
## k2 0.01 deparm
## g 0.50 deparm
##
## Starting values for the transformed parameters actually optimised:
## value lower upper
## parent_0 97.800000 -Inf Inf
## log_k1 -2.302585 -Inf Inf
## log_k2 -4.605170 -Inf Inf
## g_ilr 0.000000 -Inf Inf
##
## Fixed parameter values:
## None
##
## Optimised, transformed parameters with symmetric confidence intervals:
## Estimate Std. Error Lower Upper
## parent_0 97.7500 1.43800 93.7500 101.70000
## log_k1 -0.6612 0.13340 -1.0310 -0.29100
## log_k2 -4.2860 0.05902 -4.4500 -4.12200
## g_ilr -0.1229 0.05121 -0.2651 0.01925
##
## Parameter correlation:
## parent_0 log_k1 log_k2 g_ilr
## parent_0 1.00000 0.1640 0.01315 0.4253
## log_k1 0.16400 1.0000 0.46478 -0.5526
## log_k2 0.01315 0.4648 1.00000 -0.6631
## g_ilr 0.42526 -0.5526 -0.66310 1.0000
##
## Residual standard error: 1.439 on 4 degrees of freedom
##
## Backtransformed parameters:
## Confidence intervals for internally transformed parameters are asymmetric.
## t-test (unrealistically) based on the assumption of normal distribution
## for estimators of untransformed parameters.
## Estimate t value Pr(>t) Lower Upper
## parent_0 97.75000 67.970 1.404e-07 93.75000 101.70000
## k1 0.51620 7.499 8.460e-04 0.35650 0.74750
## k2 0.01376 16.940 3.557e-05 0.01168 0.01621
## g 0.45660 25.410 7.121e-06 0.40730 0.50680
##
## Chi2 error levels in percent:
## err.min n.optim df
## All data 2.225 4 4
## parent 2.225 4 4
##
## Estimated disappearance times:
## DT50 DT90 DT50_k1 DT50_k2
## parent 7.464 123 1.343 50.37
##
## Data:
## time variable observed predicted residual
## 0 parent 97.8 97.75 0.05396
## 3 parent 60.0 60.45 -0.44933
## 7 parent 51.0 49.44 1.56338
## 14 parent 43.0 43.84 -0.83632
## 30 parent 35.0 35.15 -0.14707
## 60 parent 22.0 23.26 -1.25919
## 91 parent 15.0 15.18 -0.18181
## 120 parent 12.0 10.19 1.81395
</code></pre>
<pre><code class="r">plot(mm.L3[["DFOP", 1]], show_errmin = TRUE)
</code></pre>
<p><img src="data:image/png;base64,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" alt="plot of chunk unnamed-chunk-13"/></p>
<p>Here, a look to the model plot, the confidence intervals of the parameters
and the correlation matrix suggest that the parameter estimates are reliable, and
the DFOP model can be used as the best-fit model based on the \(\chi^2\) error
level criterion for laboratory data L3.</p>
<p>This is also an example where the standard t-test for the parameter <code>g_ilr</code> is
misleading, as it tests for a significant difference from zero. In this case,
zero appears to be the correct value for this parameter, and the confidence
interval for the backtransformed parameter <code>g</code> is quite narrow.</p>
<h1>Laboratory Data L4</h1>
<p>The following code defines example dataset L4 from the FOCUS kinetics
report, p. 293:</p>
<pre><code class="r">FOCUS_2006_L4 = data.frame(
t = c(0, 3, 7, 14, 30, 60, 91, 120),
parent = c(96.6, 96.3, 94.3, 88.8, 74.9, 59.9, 53.5, 49.0))
FOCUS_2006_L4_mkin <- mkin_wide_to_long(FOCUS_2006_L4)
</code></pre>
<p>Fits of the SFO and FOMC models, plots and summaries are produced below:</p>
<pre><code class="r"># Only use one core here, not to offend the CRAN checks
mm.L4 <- mmkin(c("SFO", "FOMC"), cores = 1,
list("FOCUS L4" = FOCUS_2006_L4_mkin),
quiet = TRUE)
plot(mm.L4)
</code></pre>
<p><img 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" alt="plot of chunk unnamed-chunk-15"/></p>
<p>The \(\chi^2\) error level of 3.3% as well as the plot suggest that the SFO model
fits very well. The error level at which the \(\chi^2\) test passes is slightly
lower for the FOMC model. However, the difference appears negligible.</p>
<pre><code class="r">summary(mm.L4[["SFO", 1]], data = FALSE)
</code></pre>
<pre><code>## mkin version: 0.9.46.3
## R version: 3.4.3
## Date of fit: Thu Mar 1 14:24:59 2018
## Date of summary: Thu Mar 1 14:24:59 2018
##
## Equations:
## d_parent/dt = - k_parent_sink * parent
##
## Model predictions using solution type analytical
##
## Fitted with method Port using 46 model solutions performed in 0.098 s
##
## Weighting: none
##
## Starting values for parameters to be optimised:
## value type
## parent_0 96.6 state
## k_parent_sink 0.1 deparm
##
## Starting values for the transformed parameters actually optimised:
## value lower upper
## parent_0 96.600000 -Inf Inf
## log_k_parent_sink -2.302585 -Inf Inf
##
## Fixed parameter values:
## None
##
## Optimised, transformed parameters with symmetric confidence intervals:
## Estimate Std. Error Lower Upper
## parent_0 96.44 1.94900 91.670 101.200
## log_k_parent_sink -5.03 0.07999 -5.225 -4.834
##
## Parameter correlation:
## parent_0 log_k_parent_sink
## parent_0 1.0000 0.5865
## log_k_parent_sink 0.5865 1.0000
##
## Residual standard error: 3.651 on 6 degrees of freedom
##
## Backtransformed parameters:
## Confidence intervals for internally transformed parameters are asymmetric.
## t-test (unrealistically) based on the assumption of normal distribution
## for estimators of untransformed parameters.
## Estimate t value Pr(>t) Lower Upper
## parent_0 96.440000 49.49 2.283e-09 91.670000 1.012e+02
## k_parent_sink 0.006541 12.50 8.008e-06 0.005378 7.955e-03
##
## Chi2 error levels in percent:
## err.min n.optim df
## All data 3.287 2 6
## parent 3.287 2 6
##
## Resulting formation fractions:
## ff
## parent_sink 1
##
## Estimated disappearance times:
## DT50 DT90
## parent 106 352
</code></pre>
<pre><code class="r">summary(mm.L4[["FOMC", 1]], data = FALSE)
</code></pre>
<pre><code>## mkin version: 0.9.46.3
## R version: 3.4.3
## Date of fit: Thu Mar 1 14:24:59 2018
## Date of summary: Thu Mar 1 14:24:59 2018
##
## Equations:
## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
##
## Model predictions using solution type analytical
##
## Fitted with method Port using 66 model solutions performed in 0.134 s
##
## Weighting: none
##
## Starting values for parameters to be optimised:
## value type
## parent_0 96.6 state
## alpha 1.0 deparm
## beta 10.0 deparm
##
## Starting values for the transformed parameters actually optimised:
## value lower upper
## parent_0 96.600000 -Inf Inf
## log_alpha 0.000000 -Inf Inf
## log_beta 2.302585 -Inf Inf
##
## Fixed parameter values:
## None
##
## Optimised, transformed parameters with symmetric confidence intervals:
## Estimate Std. Error Lower Upper
## parent_0 99.1400 1.6800 94.820 103.5000
## log_alpha -0.3506 0.3725 -1.308 0.6068
## log_beta 4.1740 0.5635 2.726 5.6230
##
## Parameter correlation:
## parent_0 log_alpha log_beta
## parent_0 1.0000 -0.5365 -0.6083
## log_alpha -0.5365 1.0000 0.9913
## log_beta -0.6083 0.9913 1.0000
##
## Residual standard error: 2.315 on 5 degrees of freedom
##
## Backtransformed parameters:
## Confidence intervals for internally transformed parameters are asymmetric.
## t-test (unrealistically) based on the assumption of normal distribution
## for estimators of untransformed parameters.
## Estimate t value Pr(>t) Lower Upper
## parent_0 99.1400 59.020 1.322e-08 94.8200 103.500
## alpha 0.7042 2.685 2.178e-02 0.2703 1.835
## beta 64.9800 1.775 6.807e-02 15.2600 276.600
##
## Chi2 error levels in percent:
## err.min n.optim df
## All data 2.029 3 5
## parent 2.029 3 5
##
## Estimated disappearance times:
## DT50 DT90 DT50back
## parent 108.9 1644 494.9
</code></pre>
<h1>References</h1>
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