diff options
author | Johannes Ranke <jranke@uni-bremen.de> | 2015-02-20 10:23:03 +0100 |
---|---|---|
committer | Johannes Ranke <jranke@uni-bremen.de> | 2015-02-20 10:23:03 +0100 |
commit | bac02db46d5e332f3663f0b137c6bc4da7c73d8d (patch) | |
tree | 174a76640dcf8dc354819bd09dcec39dec97dd50 | |
parent | ab654b1124281f3308fcf152da93da57e0d2b83e (diff) |
Fix printing the summary if iterations are not available
This was broken for using method.modFit = "SANN"
-rw-r--r-- | .gitignore | 1 | ||||
-rw-r--r-- | NEWS.md | 1 | ||||
-rw-r--r-- | R/mkinfit.R | 5 |
3 files changed, 6 insertions, 1 deletions
@@ -9,3 +9,4 @@ vignettes/*.toc vignettes/.build.timestamp vignettes/mkin.tex vignettes/FOCUS_Z.tex +mkin.Rcheck @@ -3,6 +3,7 @@ ## BUG FIXES - `mkinparplot()`: Avoid warnings that occurred when not all confidence intervals were available in the summary of the fit +- `print.summary.mkinfit()`: Fix printing the summary for the case that the number of iterations is not available # CHANGES in mkin VERSION 0.9-34 diff --git a/R/mkinfit.R b/R/mkinfit.R index 7a465c2b..08622f9c 100644 --- a/R/mkinfit.R +++ b/R/mkinfit.R @@ -388,6 +388,9 @@ mkinfit <- function(mkinmod, observed, }
}
+ # Return number of iterations for SANN method
+ if (method.modFit == "SANN") fit$iter = maxit.modFit
+
# We need to return some more data for summary and plotting
fit$solution_type <- solution_type
fit$transform_rates <- transform_rates
@@ -601,7 +604,7 @@ print.summary.mkinfit <- function(x, digits = max(3, getOption("digits") - 3), . cat("\nOptimised, transformed parameters:\n")
print(signif(x$par, digits = digits))
- if (x$niter != 0) {
+ if (x$calls > 0) {
cat("\nParameter correlation:\n")
if (!is.null(x$cov.unscaled)){
Corr <- cov2cor(x$cov.unscaled)
|