diff options
| author | Johannes Ranke <jranke@uni-bremen.de> | 2020-12-16 19:19:16 +0100 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2020-12-16 19:19:16 +0100 |
| commit | 22f21badb2733bc6b1d4e1d08ab1afc5ff383b07 (patch) | |
| tree | 24d5e291036b099c003fbd34ebcad80523faa75d | |
| parent | 490b11e36ad5ccbb549d664d385b01dd8b328fef (diff) | |
and update docs
| -rw-r--r-- | docs/dev/pkgdown.yml | 2 | ||||
| -rw-r--r-- | docs/dev/reference/D24_2014.html | 37 | ||||
| -rw-r--r-- | docs/dev/reference/Rplot001.png | bin | 19395 -> 1011 bytes | |||
| -rw-r--r-- | man/D24_2014.Rd | 2 |
4 files changed, 19 insertions, 22 deletions
diff --git a/docs/dev/pkgdown.yml b/docs/dev/pkgdown.yml index a106449f..afb417f7 100644 --- a/docs/dev/pkgdown.yml +++ b/docs/dev/pkgdown.yml @@ -10,7 +10,7 @@ articles: web_only/NAFTA_examples: NAFTA_examples.html web_only/benchmarks: benchmarks.html web_only/compiled_models: compiled_models.html -last_built: 2020-12-16T17:28Z +last_built: 2020-12-16T18:19Z urls: reference: https://pkgdown.jrwb.de/mkin/reference article: https://pkgdown.jrwb.de/mkin/articles diff --git a/docs/dev/reference/D24_2014.html b/docs/dev/reference/D24_2014.html index 5ebf664e..c841b68c 100644 --- a/docs/dev/reference/D24_2014.html +++ b/docs/dev/reference/D24_2014.html @@ -126,7 +126,7 @@ constrained by data protection regulations." /> <ul class="nav navbar-nav navbar-right"> <li> <a href="https://github.com/jranke/mkin/"> - <span class="fab fa fab fa-github fa-lg"></span> + <span class="fab fa-github fa-lg"></span> </a> </li> @@ -220,25 +220,22 @@ specific pieces of information in the comments.</p> #> 13 365 6.3</div><div class='input'><span class='va'>m_D24</span> <span class='op'>=</span> <span class='fu'><a href='mkinmod.html'>mkinmod</a></span><span class='op'>(</span>D24 <span class='op'>=</span> <span class='fu'><a href='mkinmod.html'>mkinsub</a></span><span class='op'>(</span><span class='st'>"SFO"</span>, to <span class='op'>=</span> <span class='st'>"DCP"</span><span class='op'>)</span>, DCP <span class='op'>=</span> <span class='fu'><a href='mkinmod.html'>mkinsub</a></span><span class='op'>(</span><span class='st'>"SFO"</span>, to <span class='op'>=</span> <span class='st'>"DCA"</span><span class='op'>)</span>, DCA <span class='op'>=</span> <span class='fu'><a href='mkinmod.html'>mkinsub</a></span><span class='op'>(</span><span class='st'>"SFO"</span><span class='op'>)</span><span class='op'>)</span> -</div><div class='output co'>#> <span class='message'>Temporary DLL for differentials generated and loaded</span></div><div class='input'><span class='fu'><a href='https://rdrr.io/r/base/print.html'>print</a></span><span class='op'>(</span><span class='va'>D24_2014</span><span class='op'>)</span> -</div><div class='output co'>#> <mkindsg> holding 5 mkinds objects -#> Title $title: Aerobic soil degradation data on 2,4-D from the EU assessment in 2014 -#> Occurrene of observed compounds $observed_n: -#> D24 DCP DCA -#> 5 4 4 -#> Meta information $meta: -#> study usda_soil_type study_moisture_ref_type rel_moisture -#> 1 Cohen 1991 Silt loam <NA> NA -#> 2 Liu and Adelfinskaya 2011 Silt loam pF1 0.5 -#> 3 Liu and Adelfinskaya 2011 Loam pF1 0.5 -#> 4 Liu and Adelfinskaya 2011 Loam pF1 0.5 -#> 5 Liu and Adelfinskaya 2011 Loamy sand pF1 0.5 -#> temperature -#> 1 25 -#> 2 20 -#> 3 20 -#> 4 20 -#> 5 20</div></pre> +</div><div class='output co'>#> <span class='message'>Temporary DLL for differentials generated and loaded</span></div><div class='input'><span class='fu'><a href='https://rdrr.io/r/base/print.html'>print</a></span><span class='op'>(</span><span class='va'>m_D24</span><span class='op'>)</span> +</div><div class='output co'>#> <mkinmod> model generated with +#> Use of formation fractions $use_of_ff: max +#> Specification $spec: +#> $D24 +#> $type: SFO; $to: DCP; $sink: TRUE +#> $DCP +#> $type: SFO; $to: DCA; $sink: TRUE +#> $DCA +#> $type: SFO; $sink: TRUE +#> Coefficient matrix $coefmat available +#> Compiled model $cf available +#> Differential equations: +#> d_D24/dt = - k_D24 * D24 +#> d_DCP/dt = + f_D24_to_DCP * k_D24 * D24 - k_DCP * DCP +#> d_DCA/dt = + f_DCP_to_DCA * k_DCP * DCP - k_DCA * DCA</div></pre> </div> <div class="col-md-3 hidden-xs hidden-sm" id="pkgdown-sidebar"> <nav id="toc" data-toggle="toc" class="sticky-top"> diff --git a/docs/dev/reference/Rplot001.png b/docs/dev/reference/Rplot001.png Binary files differindex bca41e2c..17a35806 100644 --- a/docs/dev/reference/Rplot001.png +++ b/docs/dev/reference/Rplot001.png diff --git a/man/D24_2014.Rd b/man/D24_2014.Rd index 90fde27b..d30666ac 100644 --- a/man/D24_2014.Rd +++ b/man/D24_2014.Rd @@ -40,6 +40,6 @@ print(D24_2014$ds[[1]], data = TRUE) m_D24 = mkinmod(D24 = mkinsub("SFO", to = "DCP"), DCP = mkinsub("SFO", to = "DCA"), DCA = mkinsub("SFO")) -print(D24_2014) +print(m_D24) } \keyword{datasets} |
