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| author | Johannes Ranke <jranke@uni-bremen.de> | 2020-02-14 17:47:42 +0100 | 
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2020-02-14 17:47:42 +0100 | 
| commit | ccb9c63a93d202b5adea425ae2938c8705e866c9 (patch) | |
| tree | 86562e219ca124d7bb66d255f5378a777ab4bee2 | |
| parent | 0746b099c1af576af0333a2336bc5e0d7144b3a7 (diff) | |
Delete trailing whitespace
| -rw-r--r-- | R/mmkin.R | 22 | 
1 files changed, 11 insertions, 11 deletions
| @@ -1,10 +1,10 @@  #' Fit one or more kinetic models with one or more state variables to one or  #' more datasets -#'  +#'  #' This function calls \code{\link{mkinfit}} on all combinations of models and  #' datasets specified in its first two arguments. -#'  -#' @param models Either a character vector of shorthand names like  +#' +#' @param models Either a character vector of shorthand names like  #'   \code{c("SFO", "FOMC", "DFOP", "HS", "SFORB")}, or an optionally named  #'   list of \code{\link{mkinmod}} objects.  #' @param datasets An optionally named list of datasets suitable as observed @@ -24,28 +24,28 @@  #'   plotting.  #' @keywords optimize  #' @examples -#'  +#'  #' \dontrun{  #' m_synth_SFO_lin <- mkinmod(parent = mkinsub("SFO", "M1"),  #'                            M1 = mkinsub("SFO", "M2"),  #'                            M2 = mkinsub("SFO"), use_of_ff = "max") -#'  +#'  #' m_synth_FOMC_lin <- mkinmod(parent = mkinsub("FOMC", "M1"),  #'                             M1 = mkinsub("SFO", "M2"),  #'                             M2 = mkinsub("SFO"), use_of_ff = "max") -#'  +#'  #' models <- list(SFO_lin = m_synth_SFO_lin, FOMC_lin = m_synth_FOMC_lin)  #' datasets <- lapply(synthetic_data_for_UBA_2014[1:3], function(x) x$data)  #' names(datasets) <- paste("Dataset", 1:3) -#'  +#'  #' time_default <- system.time(fits.0 <- mmkin(models, datasets, quiet = TRUE))  #' time_1 <- system.time(fits.4 <- mmkin(models, datasets, cores = 1, quiet = TRUE)) -#'  +#'  #' time_default  #' time_1 -#'  +#'  #' endpoints(fits.0[["SFO_lin", 2]]) -#'  +#'  #' # plot.mkinfit handles rows or columns of mmkin result objects  #' plot(fits.0[1, ])  #' plot(fits.0[1, ], obs_var = c("M1", "M2")) @@ -58,7 +58,7 @@  #' # allow to plot the observed variables separately  #' plot(fits.0[1, 1])  #' } -#'  +#'  #' @export mmkin  mmkin <- function(models = c("SFO", "FOMC", "DFOP"), datasets,                    cores = round(detectCores()/2), cluster = NULL, ...) | 
