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authorJohannes Ranke <jranke@uni-bremen.de>2022-10-25 16:12:39 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2022-10-25 16:12:39 +0200
commit92bd47bf45cebe660c5e7f392a4ee19f704d8a19 (patch)
tree4d27b810581f0e636635b39364cab57f114ec16d
parentcc89d84cf5c3389cdeee8e62f3bed54b89ce2764 (diff)
Address platform dependencies that surfaced on travis
-rw-r--r--tests/testthat/test_mhmkin.R13
-rw-r--r--tests/testthat/test_saemix_parent.R2
2 files changed, 10 insertions, 5 deletions
diff --git a/tests/testthat/test_mhmkin.R b/tests/testthat/test_mhmkin.R
index eced5583..fc588473 100644
--- a/tests/testthat/test_mhmkin.R
+++ b/tests/testthat/test_mhmkin.R
@@ -9,10 +9,6 @@ test_that("Multiple hierarchical kinetic models can be fitted and diagnosed", {
fits_synth_tc <- suppressWarnings(
update(fits_synth_const, error_model = "tc"))
- expect_known_output(
- print(fits_synth_const),
- "print_fits_synth_const.txt")
-
hfits <- mhmkin(list(fits_synth_const, fits_synth_tc))
expect_known_output(
@@ -40,4 +36,13 @@ test_that("Multiple hierarchical kinetic models can be fitted and diagnosed", {
expect_known_output(print(test_summary, digits = 1),
"summary_hfit_sfo_tc.txt")
+
+ # It depends on the platform exactly which of the
+ # SFO datasets fail to converge with FOMC
+ skip_on_travis()
+
+ expect_known_output(
+ print(fits_synth_const),
+ "print_fits_synth_const.txt")
+
})
diff --git a/tests/testthat/test_saemix_parent.R b/tests/testthat/test_saemix_parent.R
index 0579f22f..39f69f51 100644
--- a/tests/testthat/test_saemix_parent.R
+++ b/tests/testthat/test_saemix_parent.R
@@ -111,7 +111,7 @@ test_that("Parent fits using saemix are correctly implemented", {
transformations = "mkin")
expect_equal(
log(endpoints(dfop_saemix_1)$distimes[1:2]),
- log(endpoints(sforb_saemix_1)$distimes[1:2]), tolerance = 0.01)
+ log(endpoints(sforb_saemix_1)$distimes[1:2]), tolerance = 0.03)
expect_equal(
log(endpoints(sforb_saemix_1)$distimes[1:2]),
log(endpoints(sforb_saemix_2)$distimes[1:2]), tolerance = 0.01)

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