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authorJohannes Ranke <jranke@uni-bremen.de>2022-03-07 12:03:40 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2022-03-07 14:55:21 +0100
commit7035cde3a53781721fe15a8893fdf328c789bdd2 (patch)
treea1e4929faf9d645caedc0ed4dcc5036252497c63 /NEWS.md
parent77c248ca40b82ec00a756cd82f12968131f78959 (diff)
Remove nlmixr interface for release of mkin 1.1.0
I am postponing my attempts to get the nlmixr interface to CRAN, given some problems with nlmixr using R-devel under Windows, see https://github.com/nlmixrdevelopment/nlmixr/issues/596 and https://github.com/r-hub/rhub/issues/512, which is fixed by the removal of nlmixr from the testsuite. For the tests to be more platform independent, the biphasic mixed effects models test dataset was defined in a way that fitting should be more robust (less ill-defined).
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@@ -2,8 +2,6 @@
## Mixed-effects models
-- Introduce an interface to nlmixr, supporting estimation methods 'saem' and 'focei': S3 method 'nlmixr.mmkin' using the helper functions 'nlmixr_model' and 'nlmixr_data' to set up nlmixr models for mmkin row objects, with summary and plot methods.
-
- Reintroduce the interface to saemix (now on CRAN), in particular the generic function 'saem' with a generator 'saem.mmkin', currently using 'saemix_model' and 'saemix_data', summary and plot methods
- 'mean_degparms': New argument 'test_log_parms' that makes the function only consider log-transformed parameters where the untransformed parameters pass the t-test for a certain confidence level. This can be used to obtain more plausible starting parameters for the different mixed-effects model backends
@@ -12,7 +10,7 @@
- 'vignettes/web_only/dimethenamid_2018.rmd': Example evaluations of the dimethenamid data.
-- 'intervals': Provide methods of this nlme function for 'nlmixr.mmkin' and 'saem.mmkin' objects.
+- 'intervals': Provide a method of this nlme function for 'saem.mmkin' objects.
# mkin 1.0.5 (2021-09-15)

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