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authorJohannes Ranke <jranke@uni-bremen.de>2014-08-25 10:39:40 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2014-08-25 10:39:40 +0200
commitf30472ecd2afea6bd2153b8ad2bb2f663f3a2742 (patch)
treefbd42a39c77528592b1776b709dbc07ce57b0bca /NEWS.md
parentf4d9b1d8fc3baa668112ae2a31f5d91e8b7df9d7 (diff)
Bug fix and unit tests for mkinerrmin
See NEWS.md for details
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- The initial value (state.ini) for the observed variable with the highest observed residue is set to 100 in case it has no time zero observation and `state.ini = "auto"`
+- A basic unit test for `mkinerrmin()` was written
+
## BUG FIXES
- `mkinfit()`: The internally fitted parameter for `g` was named `g_ilr` even when `transform_fractions=FALSE`
- `mkinfit()`: The initial value (state.ini) for the parent compound was not set when the parent was not the (only) variable with the highest value in the observed data.
+- `mkinerrmin()`: When checking for degrees of freedom for metabolites, check
+ if their time zero value is fixed instead of checking if the observed value
+ is zero. This ensures correct calculation of degrees of freedom also in cases
+ where the metabolite residue at time zero is greater zero.
+
## MINOR CHANGES
- The formatting of differential equations in the summary was improved by wrapping overly long lines

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