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authorJohannes Ranke <jranke@uni-bremen.de>2014-07-21 08:20:44 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2014-07-21 09:20:58 +0200
commita1567638a3ba9f4d62fa199525097a94ddfd7912 (patch)
treea223ff07ae669b61c44b97dcbfd5a48f5243ac24 /NEWS.md
parent8def5006fc81c032c3fc99751e062cdb32a81cc1 (diff)
Bugfix, model shorthand, state.ini[[1]] from observed data
- The bug occurred when using transform_rates=FALSE for FOMC, DFOP or HS - Make it possible to use mkinfit("SFO", ...) - Take initial mean value at time zero for the variable with the highest value in the observed data - Update of vignette/FOCUS_L - Improve the Makefile to build single vignettes
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## NEW FEATURES
+- The default for the initial value for the first state value is now taken from the mean of the observations at time zero, if available.
+
+- The kinetic model can alternatively be specified with a shorthand name for parent only degradation models, e.g. `SFO`, or `DFOP`.
+
- Optimisation method, number of model evaluations and time elapsed during optimisation are given in the summary of mkinfit objects.
- The maximum number of iterations in the optimisation algorithm can be specified using the argument `maxit.modFit` to the mkinfit function.
@@ -10,6 +14,8 @@
## BUG FIXES
+- `transform_rates=FALSE` in `mkinfit` now also works for FOMC and HS models.
+
- Initial values for formation fractions were not set in all cases.
- No warning was given when the fit did not converge when a method other than the default Levenberg-Marquardt method `Marq` was used.

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