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| author | Johannes Ranke <jranke@uni-bremen.de> | 2015-06-20 01:06:24 +0200 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2015-06-20 03:59:56 +0200 |
| commit | 062b9cc1d084e8bb5e552076fc48ade4b3050644 (patch) | |
| tree | bfb8acaf64fbbefbd7423cf6d0cfdb5119120a26 /NEWS.md | |
| parent | 6281424beafe531c9891670c3227ab12e9a21990 (diff) | |
Low-level generation of compiled models
As it is unclear if and when ccSolve will be published on CRAN,
the generation, compilation and use of the C version of the
system of differential equations was developed for mkin, inspired and
guided by the code from the ccSolve package. Many thanks again to
Karline Soetaert for all of her work on this and other R packages.
Now all model types, including the Hockey-Stick model for the parent
compund and the IORE model for parent and/or metabolites can be compiled.
Diffstat (limited to 'NEWS.md')
| -rw-r--r-- | NEWS.md | 2 |
1 files changed, 1 insertions, 1 deletions
@@ -2,7 +2,7 @@ ## MAJOR CHANGES -- If the ccSolve package is installed, use a version of the differential equation model compiled from C code, which is a huge performance boost for models where only the deSolve method works. Compiled models using the Hockey Stick model (HS) are not supported (yet). +- If a compiler (gcc) is installed, use a version of the differential equation model compiled from C code, which is a huge performance boost for models where only the deSolve method works. - `mkinmod()`: Create a list component $compiled in the list returned by mkinmod, if a version can be compiled from autogenerated C code (see above). - `mkinfit()`: Set the default `solution_type` to `deSolve` when a compiled version of the model is present, except if an analytical solution is possible. |