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| author | Johannes Ranke <jranke@uni-bremen.de> | 2020-05-10 21:53:00 +0200 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2020-05-10 21:53:00 +0200 |
| commit | d113cd79b178fdc91aecb894707ed356129dfb75 (patch) | |
| tree | dc28e049e94eb3ee9745f9cd86387de96a894c93 /R/create_deg_func.R | |
| parent | efab37957381919c21d874906ce870f4941c760a (diff) | |
Default to analytical for coupled models if available
This revealed that transforming rates is necessary for fitting
the analytical solution of the SFO-SFO model to the FOCUS D dataset.
Benchmarks show that fitting coupled models with deSolve got a bit
slower through the latest changes
Diffstat (limited to 'R/create_deg_func.R')
| -rw-r--r-- | R/create_deg_func.R | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/R/create_deg_func.R b/R/create_deg_func.R index 886c5e8b..6c0ae40b 100644 --- a/R/create_deg_func.R +++ b/R/create_deg_func.R @@ -51,7 +51,8 @@ create_deg_func <- function(spec, use_of_ff = c("min", "max")) { n10 <- paste0("odeini['", parent, "']") n20 <- paste0("odeini['", n2, "']") - if (all(use_of_ff == "max", spec[[1]]$sink == TRUE, length(obs_vars) == 2, spec[[2]]$type == "SFO")) { + if (all(use_of_ff == "max", spec[[1]]$sink == TRUE, length(obs_vars) == 2, + spec[[1]]$type == "SFO", spec[[2]]$type == "SFO")) { supported <- TRUE k1 <- paste0("k_", n1) k2 <- paste0("k_", n2) |