diff options
| author | Johannes Ranke <jranke@uni-bremen.de> | 2020-11-09 11:59:16 +0100 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2020-11-09 11:59:16 +0100 |
| commit | a52d76a13f36c112e27383af1cac3f98b1bbed0a (patch) | |
| tree | 18f61d83823fad7ae67d1ada1975d4e1d7781dfc /R/plot.nlme.mmkin.R | |
| parent | 8ba0bc6f52183ad97377e4d13d082be13b0383bd (diff) | |
object$mmkin_orig -> object$mmkin
Diffstat (limited to 'R/plot.nlme.mmkin.R')
| -rw-r--r-- | R/plot.nlme.mmkin.R | 10 |
1 files changed, 4 insertions, 6 deletions
diff --git a/R/plot.nlme.mmkin.R b/R/plot.nlme.mmkin.R index 05a17a22..4228b18a 100644 --- a/R/plot.nlme.mmkin.R +++ b/R/plot.nlme.mmkin.R @@ -13,8 +13,6 @@ if(getRversion() >= '2.15.1') utils::globalVariables("ds") #' @param ymax Vector of maximum y axis values #' @param ncol.legend Number of columns to use in the legend #' @param nrow.legend Number of rows to use in the legend -#' @param \dots Further arguments passed to \code{\link{plot.mkinfit}} and -#' \code{\link{mkinresplot}}. #' @param resplot Should the residuals plotted against time or against #' predicted values? #' @param col_ds Colors used for plotting the observed data and the @@ -41,7 +39,7 @@ if(getRversion() >= '2.15.1') utils::globalVariables("ds") #' plot(f_nlme) #' } #' @export -plot.nlme.mmkin <- function(x, i = 1:ncol(x$mmkin_orig), +plot.nlme.mmkin <- function(x, i = 1:ncol(x$mmkin), obs_vars = names(x$mkinmod$map), standardized = TRUE, xlab = "Time", @@ -55,13 +53,13 @@ plot.nlme.mmkin <- function(x, i = 1:ncol(x$mmkin_orig), pch_ds = 1:length(i), col_ds = pch_ds + 1, lty_ds = col_ds, - frame = TRUE, ...) + frame = TRUE) { oldpar <- par(no.readonly = TRUE) - fit_1 = x$mmkin_orig[[1]] - ds_names <- colnames(x$mmkin_orig) + fit_1 = x$mmkin[[1]] + ds_names <- colnames(x$mmkin) degparms_optim <- coefficients(x) degparms_optim_names <- names(degparms_optim) |