diff options
author | Johannes Ranke <jranke@uni-bremen.de> | 2022-03-02 08:30:46 +0100 |
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committer | Johannes Ranke <jranke@uni-bremen.de> | 2022-03-02 08:30:46 +0100 |
commit | 6468bc31254baeac7dad90a38715714291be30ae (patch) | |
tree | 7fa39286d2b56e4bd86152abec493f6dbd8c5576 /R/tffm0.R | |
parent | 1ba0938b5a39f9d376b54fe3469b40aafea9e8e3 (diff) |
Add a test for tffm0()
Diffstat (limited to 'R/tffm0.R')
-rw-r--r-- | R/tffm0.R | 19 |
1 files changed, 11 insertions, 8 deletions
@@ -1,15 +1,18 @@ #' Transform formation fractions as in the first published mkin version #' -#' The transformed fractions can be restricted between 0 and 1 in model -#' optimisations. Therefore this transformation was used originally in mkin. It -#' was later replaced by the [ilr] transformation because the ilr transformed +#' This transformation was used originally in mkin, in order to implement a +#' constraint for the sum of formation fractions to be smaller than 1. It was +#' later replaced by the [ilr] transformation because the ilr transformed #' fractions can assumed to follow normal distribution. As the ilr #' transformation is not available in [RxODE] and can therefore not be used in -#' the nlmixr modelling language, this transformation is currently used for -#' translating mkin models with formation fractions to more than one target -#' compartment for fitting with nlmixr in [nlmixr_model]. However, -#' this implementation cannot be used there, as it is not accessible -#' from RxODE. +#' the nlmixr modelling language, the original transformation is currently used +#' for translating mkin models with formation fractions to more than one target +#' compartment for fitting with nlmixr in [nlmixr_model]. However, this +#' implementation cannot be used there, as it is not accessible from RxODE. +#' +#' If the transformed formation fractions are restricted to the interval +#' between 0 and 1, the sum of backtransformed values is restricted +#' to this interval. #' #' @param ff Vector of untransformed formation fractions. The sum #' must be smaller or equal to one |