diff options
author | Johannes Ranke <jranke@uni-bremen.de> | 2022-10-28 11:59:54 +0200 |
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committer | Johannes Ranke <jranke@uni-bremen.de> | 2022-10-28 11:59:54 +0200 |
commit | b1740ade9a1746ccdb325b95915ef88872489f03 (patch) | |
tree | 7f39227fda408ce2f788dd9481266167fb87505e /R | |
parent | 782bb645325efa8d1d1f971370478fd369b0a107 (diff) |
Export status method for mhmkin, move to status.R
Diffstat (limited to 'R')
-rw-r--r-- | R/mhmkin.R | 39 | ||||
-rw-r--r-- | R/status.R | 43 |
2 files changed, 43 insertions, 39 deletions
@@ -136,45 +136,6 @@ print.mhmkin <- function(x, ...) { print(status(x)) } -status.mhmkin <- function(object, ...) { - if (inherits(object[[1]], "saem.mmkin")) { - test_func <- function(fit) { - if (inherits(fit$so, "try-error")) { - return("E") - } else { - if (!is.null(fit$FIM_failed)) { - return_values <- c("fixed effects" = "Fth", - "random effects and error model parameters" = "FO") - return(paste(return_values[fit$FIM_failed], collapse = ", ")) - } else { - return("OK") - } - } - } - } else { - stop("Only mhmkin objects containing saem.mmkin objects currently supported") - } - result <- lapply(object, test_func) - result <- unlist(result) - dim(result) <- dim(object) - dimnames(result) <- dimnames(object) - - class(result) <- "status.mhmkin" - return(result) -} - -#' @export -print.status.mhmkin <- function(x, ...) { - class(x) <- NULL - print(x, quote = FALSE) - cat("\n") - if (any(x == "OK")) cat("OK: Fit terminated successfully\n") - if (any(x == "Fth")) cat("Fth: Could not invert FIM for fixed effects\n") - if (any(x == "FO")) cat("FO: Could not invert FIM for random effects and error model parameters\n") - if (any(x == "Fth, FO")) cat("Fth, FO: Could not invert FIM for fixed effects, nor for random effects and error model parameters\n") - if (any(x == "E")) cat("E: Error\n") -} - #' @export AIC.mhmkin <- function(object, ..., k = 2) { if (inherits(object[[1]], "saem.mmkin")) { @@ -68,3 +68,46 @@ print.status.mmkin <- function(x, ...) { if (any(x == "OK")) cat("OK: No warnings\n") if (any(x == "E")) cat("E: Error\n") } + +#' @rdname status +#' @export +status.mhmkin <- function(object, ...) { + if (inherits(object[[1]], "saem.mmkin")) { + test_func <- function(fit) { + if (inherits(fit$so, "try-error")) { + return("E") + } else { + if (!is.null(fit$FIM_failed)) { + return_values <- c("fixed effects" = "Fth", + "random effects and error model parameters" = "FO") + return(paste(return_values[fit$FIM_failed], collapse = ", ")) + } else { + return("OK") + } + } + } + } else { + stop("Only mhmkin objects containing saem.mmkin objects currently supported") + } + result <- lapply(object, test_func) + result <- unlist(result) + dim(result) <- dim(object) + dimnames(result) <- dimnames(object) + + class(result) <- "status.mhmkin" + return(result) +} + +#' @rdname status +#' @export +print.status.mhmkin <- function(x, ...) { + class(x) <- NULL + print(x, quote = FALSE) + cat("\n") + if (any(x == "OK")) cat("OK: Fit terminated successfully\n") + if (any(x == "Fth")) cat("Fth: Could not invert FIM for fixed effects\n") + if (any(x == "FO")) cat("FO: Could not invert FIM for random effects and error model parameters\n") + if (any(x == "Fth, FO")) cat("Fth, FO: Could not invert FIM for fixed effects, nor for random effects and error model parameters\n") + if (any(x == "E")) cat("E: Error\n") +} + |