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author | Johannes Ranke <jranke@uni-bremen.de> | 2018-03-01 14:32:46 +0100 |
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committer | Johannes Ranke <jranke@uni-bremen.de> | 2018-03-01 14:32:46 +0100 |
commit | 6653ff2507f45eae909f491a9af3f1eb5358a600 (patch) | |
tree | 03a43f9cf86cc1d675eba1c6f9c5e31da9c2acdd /docs/articles/compiled_models.R | |
parent | a767013f407f7495492af6a1ceba4cf2b8aae839 (diff) |
Static documentation rebuilt using current pkgdown::build_site()
Diffstat (limited to 'docs/articles/compiled_models.R')
-rw-r--r-- | docs/articles/compiled_models.R | 55 |
1 files changed, 0 insertions, 55 deletions
diff --git a/docs/articles/compiled_models.R b/docs/articles/compiled_models.R deleted file mode 100644 index c5b06c11..00000000 --- a/docs/articles/compiled_models.R +++ /dev/null @@ -1,55 +0,0 @@ -## ---- include = FALSE---------------------------------------------------- -library(knitr) -opts_chunk$set(tidy = FALSE, cache = FALSE) - -## ----check_gcc----------------------------------------------------------- -Sys.which("gcc") - -## ----create_SFO_SFO------------------------------------------------------ -library("mkin", quietly = TRUE) -SFO_SFO <- mkinmod( - parent = mkinsub("SFO", "m1"), - m1 = mkinsub("SFO")) - -## ----benchmark_SFO_SFO, fig.height = 3----------------------------------- -if (require(rbenchmark)) { - b.1 <- benchmark( - "deSolve, not compiled" = mkinfit(SFO_SFO, FOCUS_2006_D, - solution_type = "deSolve", - use_compiled = FALSE, quiet = TRUE), - "Eigenvalue based" = mkinfit(SFO_SFO, FOCUS_2006_D, - solution_type = "eigen", quiet = TRUE), - "deSolve, compiled" = mkinfit(SFO_SFO, FOCUS_2006_D, - solution_type = "deSolve", quiet = TRUE), - replications = 3) - print(b.1) - factor_SFO_SFO <- round(b.1["1", "relative"]) -} else { - factor_SFO_SFO <- NA - print("R package benchmark is not available") -} - -## ----benchmark_FOMC_SFO, fig.height = 3---------------------------------- -if (require(rbenchmark)) { - FOMC_SFO <- mkinmod( - parent = mkinsub("FOMC", "m1"), - m1 = mkinsub( "SFO")) - - b.2 <- benchmark( - "deSolve, not compiled" = mkinfit(FOMC_SFO, FOCUS_2006_D, - use_compiled = FALSE, quiet = TRUE), - "deSolve, compiled" = mkinfit(FOMC_SFO, FOCUS_2006_D, quiet = TRUE), - replications = 3) - print(b.2) - factor_FOMC_SFO <- round(b.2["1", "relative"]) -} else { - factor_FOMC_SFO <- NA - print("R package benchmark is not available") -} - -## ----sessionInfo, echo = FALSE------------------------------------------- -cat(capture.output(sessionInfo())[1:3], sep = "\n") -if(!inherits(try(cpuinfo <- readLines("/proc/cpuinfo")), "try-error")) { - cat(gsub("model name\t: ", "CPU model: ", cpuinfo[grep("model name", cpuinfo)[1]])) -} - |