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authorJohannes Ranke <jranke@uni-bremen.de>2023-11-16 06:02:05 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2023-11-16 06:02:05 +0100
commit8b7edd4eaf0d196e674a085f744d1a69260a6c91 (patch)
tree96d79f504b775d2626ab2a9f700732bd142d66d9 /docs/articles/prebuilt/2022_dmta_pathway.html
parent6ae6b5230efd2e3d25b68600bd988ded60d3db77 (diff)
Update pkgdown docs to bootstrap 5 with search
Diffstat (limited to 'docs/articles/prebuilt/2022_dmta_pathway.html')
-rw-r--r--docs/articles/prebuilt/2022_dmta_pathway.html254
1 files changed, 103 insertions, 151 deletions
diff --git a/docs/articles/prebuilt/2022_dmta_pathway.html b/docs/articles/prebuilt/2022_dmta_pathway.html
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- <h1 data-toc-skip>Testing hierarchical pathway kinetics with
-residue data on dimethenamid and dimethenamid-P</h1>
+
+<div class="row">
+ <main id="main" class="col-md-9"><div class="page-header">
+ <img src="" class="logo" alt=""><h1>Testing hierarchical pathway kinetics with residue data on dimethenamid and dimethenamid-P</h1>
<h4 data-toc-skip class="author">Johannes
Ranke</h4>
<h4 data-toc-skip class="date">Last change on 20 April 2023,
-last compiled on 30 October 2023</h4>
+last compiled on 16 November 2023</h4>
<small class="dont-index">Source: <a href="https://github.com/jranke/mkin/blob/HEAD/vignettes/prebuilt/2022_dmta_pathway.rmd" class="external-link"><code>vignettes/prebuilt/2022_dmta_pathway.rmd</code></a></small>
- <div class="hidden name"><code>2022_dmta_pathway.rmd</code></div>
-
+ <div class="d-none name"><code>2022_dmta_pathway.rmd</code></div>
</div>
@@ -1979,23 +1938,23 @@ error<a class="anchor" aria-label="anchor" href="#improved-fit-of-the-sforb-path
<div class="section level3">
<h3 id="session-info">Session info<a class="anchor" aria-label="anchor" href="#session-info"></a>
</h3>
-<pre><code>R version 4.3.1 (2023-06-16)
+<pre><code>R version 4.3.2 (2023-10-31)
Platform: x86_64-pc-linux-gnu (64-bit)
-Running under: Ubuntu 22.04.3 LTS
+Running under: Debian GNU/Linux 12 (bookworm)
Matrix products: default
-BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.10.0
-LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.10.0
+BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.11.0
+LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.11.0
locale:
- [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
- [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
- [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
- [7] LC_PAPER=en_US.UTF-8 LC_NAME=C
+ [1] LC_CTYPE=de_DE.UTF-8 LC_NUMERIC=C
+ [3] LC_TIME=de_DE.UTF-8 LC_COLLATE=de_DE.UTF-8
+ [5] LC_MONETARY=de_DE.UTF-8 LC_MESSAGES=de_DE.UTF-8
+ [7] LC_PAPER=de_DE.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
-[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
+[11] LC_MEASUREMENT=de_DE.UTF-8 LC_IDENTIFICATION=C
-time zone: Europe/Zurich
+time zone: Europe/Berlin
tzcode source: system (glibc)
attached base packages:
@@ -2003,61 +1962,54 @@ attached base packages:
[8] base
other attached packages:
-[1] saemix_3.2 npde_3.3 knitr_1.44 mkin_1.2.6
+[1] saemix_3.2 npde_3.3 knitr_1.42 mkin_1.2.6
loaded via a namespace (and not attached):
- [1] sass_0.4.7 utf8_1.2.3 generics_0.1.3 stringi_1.7.12
- [5] lattice_0.21-9 digest_0.6.33 magrittr_2.0.3 evaluate_0.22
- [9] grid_4.3.1 fastmap_1.1.1 rprojroot_2.0.3 jsonlite_1.8.7
-[13] processx_3.8.2 pkgbuild_1.4.2 deSolve_1.35 mclust_6.0.0
-[17] ps_1.7.5 gridExtra_2.3 purrr_1.0.1 fansi_1.0.4
-[21] scales_1.2.1 codetools_0.2-19 textshaping_0.3.6 jquerylib_0.1.4
-[25] cli_3.6.1 crayon_1.5.2 rlang_1.1.1 munsell_0.5.0
-[29] cachem_1.0.8 yaml_2.3.7 inline_0.3.19 tools_4.3.1
-[33] memoise_2.0.1 dplyr_1.1.2 colorspace_2.1-0 ggplot2_3.4.2
-[37] vctrs_0.6.3 R6_2.5.1 zoo_1.8-12 lifecycle_1.0.3
-[41] stringr_1.5.0 fs_1.6.3 MASS_7.3-60 ragg_1.2.5
-[45] callr_3.7.3 pkgconfig_2.0.3 desc_1.4.2 pkgdown_2.0.7
-[49] bslib_0.5.1 pillar_1.9.0 gtable_0.3.3 glue_1.6.2
-[53] systemfonts_1.0.4 xfun_0.40 tibble_3.2.1 lmtest_0.9-40
-[57] tidyselect_1.2.0 rstudioapi_0.15.0 htmltools_0.5.6.1 nlme_3.1-163
-[61] rmarkdown_2.23 compiler_4.3.1 prettyunits_1.2.0</code></pre>
+ [1] sass_0.4.6 utf8_1.2.3 generics_0.1.3 stringi_1.7.12
+ [5] lattice_0.21-8 digest_0.6.31 magrittr_2.0.3 evaluate_0.21
+ [9] grid_4.3.2 fastmap_1.1.1 rprojroot_2.0.3 jsonlite_1.8.4
+[13] processx_3.8.1 pkgbuild_1.4.0 deSolve_1.35 DBI_1.1.3
+[17] mclust_6.0.0 ps_1.7.5 gridExtra_2.3 purrr_1.0.1
+[21] fansi_1.0.4 scales_1.2.1 codetools_0.2-19 textshaping_0.3.6
+[25] jquerylib_0.1.4 cli_3.6.1 crayon_1.5.2 rlang_1.1.1
+[29] munsell_0.5.0 cachem_1.0.8 yaml_2.3.7 inline_0.3.19
+[33] tools_4.3.2 memoise_2.0.1 dplyr_1.1.2 colorspace_2.1-0
+[37] ggplot2_3.4.2 vctrs_0.6.2 R6_2.5.1 zoo_1.8-12
+[41] lifecycle_1.0.3 stringr_1.5.0 fs_1.6.2 MASS_7.3-60
+[45] ragg_1.2.5 callr_3.7.3 pkgconfig_2.0.3 desc_1.4.2
+[49] pkgdown_2.0.7 bslib_0.4.2 pillar_1.9.0 gtable_0.3.3
+[53] glue_1.6.2 systemfonts_1.0.4 highr_0.10 xfun_0.39
+[57] tibble_3.2.1 lmtest_0.9-40 tidyselect_1.2.0 htmltools_0.5.5
+[61] nlme_3.1-163 rmarkdown_2.21 compiler_4.3.2 prettyunits_1.1.1</code></pre>
</div>
<div class="section level3">
<h3 id="hardware-info">Hardware info<a class="anchor" aria-label="anchor" href="#hardware-info"></a>
</h3>
-<pre><code>CPU model: Intel(R) Xeon(R) Gold 6134 CPU @ 3.20GHz</code></pre>
-<pre><code>MemTotal: 247605564 kB</code></pre>
+<pre><code>CPU model: AMD Ryzen 9 7950X 16-Core Processor</code></pre>
+<pre><code>MemTotal: 64927712 kB</code></pre>
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