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authorJohannes Ranke <jranke@uni-bremen.de>2019-02-21 16:16:21 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2019-02-21 16:16:21 +0100
commit5181a55b1619c153b690db97ee82698bf76525ff (patch)
tree205137000fd034ced0d55de2830e6fb5a45c4535 /docs/articles
parent6695a307c4be2b8eee1bacd75b25fc10c3dd02b1 (diff)
Static documentation rebuilt by pkgdown
to get the codecov badge into the docs
Diffstat (limited to 'docs/articles')
-rw-r--r--docs/articles/FOCUS_D.html6
-rw-r--r--docs/articles/FOCUS_L.html38
-rw-r--r--docs/articles/web_only/compiled_models.html10
3 files changed, 27 insertions, 27 deletions
diff --git a/docs/articles/FOCUS_D.html b/docs/articles/FOCUS_D.html
index 4dd23fd2..33424756 100644
--- a/docs/articles/FOCUS_D.html
+++ b/docs/articles/FOCUS_D.html
@@ -163,8 +163,8 @@
<div class="sourceCode" id="cb10"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb10-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(fit)</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Thu Feb 21 15:13:35 2019
-## Date of summary: Thu Feb 21 15:13:35 2019
+## Date of fit: Thu Feb 21 16:13:41 2019
+## Date of summary: Thu Feb 21 16:13:41 2019
##
## Equations:
## d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent
@@ -172,7 +172,7 @@
##
## Model predictions using solution type deSolve
##
-## Fitted with method Port using 153 model solutions performed in 0.683 s
+## Fitted with method Port using 153 model solutions performed in 0.697 s
##
## Weighting: none
##
diff --git a/docs/articles/FOCUS_L.html b/docs/articles/FOCUS_L.html
index 0820b21a..b422b315 100644
--- a/docs/articles/FOCUS_L.html
+++ b/docs/articles/FOCUS_L.html
@@ -111,15 +111,15 @@
<a class="sourceLine" id="cb2-2" data-line-number="2"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L1.SFO)</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Thu Feb 21 15:13:37 2019
-## Date of summary: Thu Feb 21 15:13:37 2019
+## Date of fit: Thu Feb 21 16:13:43 2019
+## Date of summary: Thu Feb 21 16:13:43 2019
##
## Equations:
## d_parent/dt = - k_parent_sink * parent
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 37 model solutions performed in 0.101 s
+## Fitted with method Port using 37 model solutions performed in 0.095 s
##
## Weighting: none
##
@@ -202,15 +202,15 @@
<div class="sourceCode" id="cb7"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb7-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L1.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Thu Feb 21 15:13:39 2019
-## Date of summary: Thu Feb 21 15:13:39 2019
+## Date of fit: Thu Feb 21 16:13:45 2019
+## Date of summary: Thu Feb 21 16:13:45 2019
##
## Equations:
## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 611 model solutions performed in 1.545 s
+## Fitted with method Port using 611 model solutions performed in 1.509 s
##
## Weighting: none
##
@@ -297,8 +297,8 @@
<div class="sourceCode" id="cb12"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb12-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L2.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Thu Feb 21 15:13:39 2019
-## Date of summary: Thu Feb 21 15:13:39 2019
+## Date of fit: Thu Feb 21 16:13:45 2019
+## Date of summary: Thu Feb 21 16:13:45 2019
##
## Equations:
## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
@@ -368,8 +368,8 @@
<div class="sourceCode" id="cb15"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb15-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L2.DFOP, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Thu Feb 21 15:13:40 2019
-## Date of summary: Thu Feb 21 15:13:40 2019
+## Date of fit: Thu Feb 21 16:13:46 2019
+## Date of summary: Thu Feb 21 16:13:46 2019
##
## Equations:
## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) *
@@ -378,7 +378,7 @@
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 336 model solutions performed in 0.852 s
+## Fitted with method Port using 336 model solutions performed in 0.842 s
##
## Weighting: none
##
@@ -460,8 +460,8 @@
<div class="sourceCode" id="cb21"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb21-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L3[[<span class="st">"DFOP"</span>, <span class="dv">1</span>]])</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Thu Feb 21 15:13:41 2019
-## Date of summary: Thu Feb 21 15:13:41 2019
+## Date of fit: Thu Feb 21 16:13:47 2019
+## Date of summary: Thu Feb 21 16:13:48 2019
##
## Equations:
## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) *
@@ -561,15 +561,15 @@
<div class="sourceCode" id="cb26"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb26-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L4[[<span class="st">"SFO"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Thu Feb 21 15:13:42 2019
-## Date of summary: Thu Feb 21 15:13:42 2019
+## Date of fit: Thu Feb 21 16:13:48 2019
+## Date of summary: Thu Feb 21 16:13:48 2019
##
## Equations:
## d_parent/dt = - k_parent_sink * parent
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 46 model solutions performed in 0.112 s
+## Fitted with method Port using 46 model solutions performed in 0.11 s
##
## Weighting: none
##
@@ -621,15 +621,15 @@
<div class="sourceCode" id="cb28"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb28-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L4[[<span class="st">"FOMC"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Thu Feb 21 15:13:42 2019
-## Date of summary: Thu Feb 21 15:13:42 2019
+## Date of fit: Thu Feb 21 16:13:48 2019
+## Date of summary: Thu Feb 21 16:13:48 2019
##
## Equations:
## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 66 model solutions performed in 0.169 s
+## Fitted with method Port using 66 model solutions performed in 0.163 s
##
## Weighting: none
##
diff --git a/docs/articles/web_only/compiled_models.html b/docs/articles/web_only/compiled_models.html
index b00fda46..8f13b969 100644
--- a/docs/articles/web_only/compiled_models.html
+++ b/docs/articles/web_only/compiled_models.html
@@ -126,9 +126,9 @@
<a class="sourceLine" id="cb5-16" data-line-number="16">}</a></code></pre></div>
<pre><code>## Lade nötiges Paket: rbenchmark</code></pre>
<pre><code>## test replications elapsed relative user.self sys.self
-## 3 deSolve, compiled 3 2.340 1.000 2.338 0
-## 1 deSolve, not compiled 3 17.729 7.576 17.720 0
-## 2 Eigenvalue based 3 2.889 1.235 2.888 0
+## 3 deSolve, compiled 3 2.347 1.000 2.346 0
+## 1 deSolve, not compiled 3 17.693 7.539 17.684 0
+## 2 Eigenvalue based 3 2.907 1.239 2.905 0
## user.child sys.child
## 3 0 0
## 1 0 0
@@ -157,8 +157,8 @@
<a class="sourceLine" id="cb8-16" data-line-number="16">}</a></code></pre></div>
<pre><code>## Successfully compiled differential equation model from auto-generated C code.</code></pre>
<pre><code>## test replications elapsed relative user.self sys.self
-## 2 deSolve, compiled 3 4.122 1.00 4.120 0
-## 1 deSolve, not compiled 3 37.471 9.09 37.452 0
+## 2 deSolve, compiled 3 4.278 1.000 4.276 0
+## 1 deSolve, not compiled 3 37.855 8.849 37.833 0
## user.child sys.child
## 2 0 0
## 1 0 0</code></pre>

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