diff options
author | Johannes Ranke <jranke@uni-bremen.de> | 2019-02-21 16:16:21 +0100 |
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committer | Johannes Ranke <jranke@uni-bremen.de> | 2019-02-21 16:16:21 +0100 |
commit | 5181a55b1619c153b690db97ee82698bf76525ff (patch) | |
tree | 205137000fd034ced0d55de2830e6fb5a45c4535 /docs/articles | |
parent | 6695a307c4be2b8eee1bacd75b25fc10c3dd02b1 (diff) |
Static documentation rebuilt by pkgdown
to get the codecov badge into the docs
Diffstat (limited to 'docs/articles')
-rw-r--r-- | docs/articles/FOCUS_D.html | 6 | ||||
-rw-r--r-- | docs/articles/FOCUS_L.html | 38 | ||||
-rw-r--r-- | docs/articles/web_only/compiled_models.html | 10 |
3 files changed, 27 insertions, 27 deletions
diff --git a/docs/articles/FOCUS_D.html b/docs/articles/FOCUS_D.html index 4dd23fd2..33424756 100644 --- a/docs/articles/FOCUS_D.html +++ b/docs/articles/FOCUS_D.html @@ -163,8 +163,8 @@ <div class="sourceCode" id="cb10"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb10-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(fit)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 15:13:35 2019 -## Date of summary: Thu Feb 21 15:13:35 2019 +## Date of fit: Thu Feb 21 16:13:41 2019 +## Date of summary: Thu Feb 21 16:13:41 2019 ## ## Equations: ## d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent @@ -172,7 +172,7 @@ ## ## Model predictions using solution type deSolve ## -## Fitted with method Port using 153 model solutions performed in 0.683 s +## Fitted with method Port using 153 model solutions performed in 0.697 s ## ## Weighting: none ## diff --git a/docs/articles/FOCUS_L.html b/docs/articles/FOCUS_L.html index 0820b21a..b422b315 100644 --- a/docs/articles/FOCUS_L.html +++ b/docs/articles/FOCUS_L.html @@ -111,15 +111,15 @@ <a class="sourceLine" id="cb2-2" data-line-number="2"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L1.SFO)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 15:13:37 2019 -## Date of summary: Thu Feb 21 15:13:37 2019 +## Date of fit: Thu Feb 21 16:13:43 2019 +## Date of summary: Thu Feb 21 16:13:43 2019 ## ## Equations: ## d_parent/dt = - k_parent_sink * parent ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 37 model solutions performed in 0.101 s +## Fitted with method Port using 37 model solutions performed in 0.095 s ## ## Weighting: none ## @@ -202,15 +202,15 @@ <div class="sourceCode" id="cb7"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb7-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L1.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 15:13:39 2019 -## Date of summary: Thu Feb 21 15:13:39 2019 +## Date of fit: Thu Feb 21 16:13:45 2019 +## Date of summary: Thu Feb 21 16:13:45 2019 ## ## Equations: ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 611 model solutions performed in 1.545 s +## Fitted with method Port using 611 model solutions performed in 1.509 s ## ## Weighting: none ## @@ -297,8 +297,8 @@ <div class="sourceCode" id="cb12"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb12-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L2.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 15:13:39 2019 -## Date of summary: Thu Feb 21 15:13:39 2019 +## Date of fit: Thu Feb 21 16:13:45 2019 +## Date of summary: Thu Feb 21 16:13:45 2019 ## ## Equations: ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent @@ -368,8 +368,8 @@ <div class="sourceCode" id="cb15"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb15-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L2.DFOP, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 15:13:40 2019 -## Date of summary: Thu Feb 21 15:13:40 2019 +## Date of fit: Thu Feb 21 16:13:46 2019 +## Date of summary: Thu Feb 21 16:13:46 2019 ## ## Equations: ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * @@ -378,7 +378,7 @@ ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 336 model solutions performed in 0.852 s +## Fitted with method Port using 336 model solutions performed in 0.842 s ## ## Weighting: none ## @@ -460,8 +460,8 @@ <div class="sourceCode" id="cb21"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb21-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L3[[<span class="st">"DFOP"</span>, <span class="dv">1</span>]])</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 15:13:41 2019 -## Date of summary: Thu Feb 21 15:13:41 2019 +## Date of fit: Thu Feb 21 16:13:47 2019 +## Date of summary: Thu Feb 21 16:13:48 2019 ## ## Equations: ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * @@ -561,15 +561,15 @@ <div class="sourceCode" id="cb26"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb26-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L4[[<span class="st">"SFO"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 15:13:42 2019 -## Date of summary: Thu Feb 21 15:13:42 2019 +## Date of fit: Thu Feb 21 16:13:48 2019 +## Date of summary: Thu Feb 21 16:13:48 2019 ## ## Equations: ## d_parent/dt = - k_parent_sink * parent ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 46 model solutions performed in 0.112 s +## Fitted with method Port using 46 model solutions performed in 0.11 s ## ## Weighting: none ## @@ -621,15 +621,15 @@ <div class="sourceCode" id="cb28"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb28-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L4[[<span class="st">"FOMC"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 15:13:42 2019 -## Date of summary: Thu Feb 21 15:13:42 2019 +## Date of fit: Thu Feb 21 16:13:48 2019 +## Date of summary: Thu Feb 21 16:13:48 2019 ## ## Equations: ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 66 model solutions performed in 0.169 s +## Fitted with method Port using 66 model solutions performed in 0.163 s ## ## Weighting: none ## diff --git a/docs/articles/web_only/compiled_models.html b/docs/articles/web_only/compiled_models.html index b00fda46..8f13b969 100644 --- a/docs/articles/web_only/compiled_models.html +++ b/docs/articles/web_only/compiled_models.html @@ -126,9 +126,9 @@ <a class="sourceLine" id="cb5-16" data-line-number="16">}</a></code></pre></div> <pre><code>## Lade nötiges Paket: rbenchmark</code></pre> <pre><code>## test replications elapsed relative user.self sys.self -## 3 deSolve, compiled 3 2.340 1.000 2.338 0 -## 1 deSolve, not compiled 3 17.729 7.576 17.720 0 -## 2 Eigenvalue based 3 2.889 1.235 2.888 0 +## 3 deSolve, compiled 3 2.347 1.000 2.346 0 +## 1 deSolve, not compiled 3 17.693 7.539 17.684 0 +## 2 Eigenvalue based 3 2.907 1.239 2.905 0 ## user.child sys.child ## 3 0 0 ## 1 0 0 @@ -157,8 +157,8 @@ <a class="sourceLine" id="cb8-16" data-line-number="16">}</a></code></pre></div> <pre><code>## Successfully compiled differential equation model from auto-generated C code.</code></pre> <pre><code>## test replications elapsed relative user.self sys.self -## 2 deSolve, compiled 3 4.122 1.00 4.120 0 -## 1 deSolve, not compiled 3 37.471 9.09 37.452 0 +## 2 deSolve, compiled 3 4.278 1.000 4.276 0 +## 1 deSolve, not compiled 3 37.855 8.849 37.833 0 ## user.child sys.child ## 2 0 0 ## 1 0 0</code></pre> |